Hb_003025_060

Information

Type -
Description -
Location Contig3025: 48700-50133
Sequence    

Annotation

kegg
ID cit:102628305
description protein TOO MANY MOUTHS-like
nr
ID XP_012084999.1
description PREDICTED: protein TOO MANY MOUTHS [Jatropha curcas]
swissprot
ID Q9SSD1
description Protein TOO MANY MOUTHS OS=Arabidopsis thaliana GN=TMM PE=1 SV=1
trembl
ID A0A067EXH5
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044868mg PE=4 SV=1
Gene Ontology
ID GO:0009505
description protein too many mouths

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003025_060 0.0 - - PREDICTED: protein TOO MANY MOUTHS [Jatropha curcas]
2 Hb_000876_010 0.1635100536 - - Uncharacterized protein TCM_022272 [Theobroma cacao]
3 Hb_106873_020 0.1788992477 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
4 Hb_000589_230 0.1832827129 - - unknown [Picea sitchensis]
5 Hb_005723_070 0.1884191724 - - hypothetical protein CISIN_1g011514mg [Citrus sinensis]
6 Hb_002126_020 0.195433408 - - ferrochelatase [Medicago truncatula]
7 Hb_060054_010 0.2013589961 - - NADH-ubiquinone oxidoreductase subunit B17.2, putative [Ricinus communis]
8 Hb_006794_010 0.2086932106 - - elicitor-responsive protein [Hevea brasiliensis]
9 Hb_000033_070 0.2132659967 - - unnamed protein product [Oryza sativa Japonica Group]
10 Hb_081815_010 0.2165395109 - - PREDICTED: uncharacterized protein LOC100266863 [Vitis vinifera]
11 Hb_002972_060 0.219783115 transcription factor TF Family: M-type mads box protein, putative [Ricinus communis]
12 Hb_005318_010 0.2276585066 - - hypothetical protein POPTR_0012s15190g, partial [Populus trichocarpa]
13 Hb_008096_020 0.2283533455 - - -
14 Hb_009119_010 0.2299955867 - - -
15 Hb_002450_130 0.230561781 - - hypothetical protein JCGZ_06565 [Jatropha curcas]
16 Hb_006162_020 0.2360368507 - - -
17 Hb_000683_090 0.2398099456 - - stress enhanced protein [Medicago truncatula]
18 Hb_005107_020 0.2464937855 - - hypothetical protein JCGZ_25266 [Jatropha curcas]
19 Hb_000130_170 0.2471151931 - - -
20 Hb_162090_010 0.2471189897 - - PREDICTED: uncharacterized protein LOC105642032 [Jatropha curcas]

Gene co-expression network

sample Hb_003025_060 Hb_003025_060 Hb_000876_010 Hb_000876_010 Hb_003025_060--Hb_000876_010 Hb_106873_020 Hb_106873_020 Hb_003025_060--Hb_106873_020 Hb_000589_230 Hb_000589_230 Hb_003025_060--Hb_000589_230 Hb_005723_070 Hb_005723_070 Hb_003025_060--Hb_005723_070 Hb_002126_020 Hb_002126_020 Hb_003025_060--Hb_002126_020 Hb_060054_010 Hb_060054_010 Hb_003025_060--Hb_060054_010 Hb_000876_010--Hb_005723_070 Hb_002450_130 Hb_002450_130 Hb_000876_010--Hb_002450_130 Hb_002972_060 Hb_002972_060 Hb_000876_010--Hb_002972_060 Hb_000130_170 Hb_000130_170 Hb_000876_010--Hb_000130_170 Hb_009119_010 Hb_009119_010 Hb_000876_010--Hb_009119_010 Hb_106873_020--Hb_000589_230 Hb_106873_020--Hb_060054_010 Hb_148658_010 Hb_148658_010 Hb_106873_020--Hb_148658_010 Hb_081815_010 Hb_081815_010 Hb_106873_020--Hb_081815_010 Hb_106873_020--Hb_005723_070 Hb_000589_230--Hb_060054_010 Hb_000589_230--Hb_081815_010 Hb_001418_060 Hb_001418_060 Hb_000589_230--Hb_001418_060 Hb_115045_010 Hb_115045_010 Hb_000589_230--Hb_115045_010 Hb_005723_070--Hb_000130_170 Hb_005723_070--Hb_002972_060 Hb_005723_070--Hb_002450_130 Hb_033312_110 Hb_033312_110 Hb_005723_070--Hb_033312_110 Hb_000300_140 Hb_000300_140 Hb_005723_070--Hb_000300_140 Hb_060458_010 Hb_060458_010 Hb_002126_020--Hb_060458_010 Hb_002126_020--Hb_106873_020 Hb_002126_020--Hb_005723_070 Hb_002126_020--Hb_000876_010 Hb_000193_030 Hb_000193_030 Hb_002126_020--Hb_000193_030 Hb_025905_020 Hb_025905_020 Hb_060054_010--Hb_025905_020 Hb_000258_360 Hb_000258_360 Hb_060054_010--Hb_000258_360 Hb_060054_010--Hb_001418_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.27669 0.0861099 0.165352 2.99648 0.32225 3.24321
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0328953 0.051758 0 0.0103364 0.108071

CAGE analysis