Hb_003031_070

Information

Type -
Description -
Location Contig3031: 69446-71059
Sequence    

Annotation

kegg
ID rcu:RCOM_0906360
description DUF26 domain-containing protein 2 precursor, putative
nr
ID XP_012092389.1
description PREDICTED: cysteine-rich repeat secretory protein 55-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JDJ5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21289 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003031_070 0.0 - - PREDICTED: cysteine-rich repeat secretory protein 55-like [Jatropha curcas]
2 Hb_047725_010 0.0596433127 - - ceramidase, putative [Ricinus communis]
3 Hb_007007_110 0.0871945636 - - hypothetical protein JCGZ_14479 [Jatropha curcas]
4 Hb_009787_020 0.1004891066 - - PREDICTED: cytochrome P450 705A5-like [Jatropha curcas]
5 Hb_007885_120 0.1118502397 - - PREDICTED: BON1-associated protein 2-like [Jatropha curcas]
6 Hb_004659_110 0.128921969 - - PREDICTED: BURP domain-containing protein 3-like [Jatropha curcas]
7 Hb_002025_120 0.1335638629 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105634212 [Jatropha curcas]
8 Hb_006816_540 0.137537046 - - PREDICTED: bidirectional sugar transporter SWEET16-like [Jatropha curcas]
9 Hb_077562_010 0.1426491658 - - PREDICTED: WAT1-related protein At5g07050 [Jatropha curcas]
10 Hb_000983_180 0.1449565603 - - cytochrome P450, putative [Ricinus communis]
11 Hb_091826_010 0.1475737474 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
12 Hb_002639_120 0.1522737999 - - unnamed protein product [Vitis vinifera]
13 Hb_004767_010 0.1551742845 - - hypothetical protein CICLE_v10010736mg [Citrus clementina]
14 Hb_002311_430 0.1566401997 - - hypothetical protein JCGZ_18918 [Jatropha curcas]
15 Hb_000413_260 0.156925423 - - kinase, putative [Ricinus communis]
16 Hb_000318_320 0.1570780399 - - PREDICTED: transmembrane protein 45B [Jatropha curcas]
17 Hb_000984_120 0.1593716063 - - receptor protein kinase, putative [Ricinus communis]
18 Hb_005054_010 0.1611212565 - - amino acid transporter, putative [Ricinus communis]
19 Hb_000172_020 0.1628532796 - - PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Vitis vinifera]
20 Hb_005096_020 0.1628579948 - - PREDICTED: DIS3-like exonuclease 2-like isoform X1 [Citrus sinensis]

Gene co-expression network

sample Hb_003031_070 Hb_003031_070 Hb_047725_010 Hb_047725_010 Hb_003031_070--Hb_047725_010 Hb_007007_110 Hb_007007_110 Hb_003031_070--Hb_007007_110 Hb_009787_020 Hb_009787_020 Hb_003031_070--Hb_009787_020 Hb_007885_120 Hb_007885_120 Hb_003031_070--Hb_007885_120 Hb_004659_110 Hb_004659_110 Hb_003031_070--Hb_004659_110 Hb_002025_120 Hb_002025_120 Hb_003031_070--Hb_002025_120 Hb_047725_010--Hb_007007_110 Hb_000318_320 Hb_000318_320 Hb_047725_010--Hb_000318_320 Hb_047725_010--Hb_009787_020 Hb_077562_010 Hb_077562_010 Hb_047725_010--Hb_077562_010 Hb_047725_010--Hb_004659_110 Hb_007007_110--Hb_000318_320 Hb_000413_260 Hb_000413_260 Hb_007007_110--Hb_000413_260 Hb_007007_110--Hb_004659_110 Hb_011609_060 Hb_011609_060 Hb_007007_110--Hb_011609_060 Hb_009787_020--Hb_004659_110 Hb_009787_020--Hb_007885_120 Hb_000702_040 Hb_000702_040 Hb_009787_020--Hb_000702_040 Hb_009787_020--Hb_007007_110 Hb_006816_540 Hb_006816_540 Hb_007885_120--Hb_006816_540 Hb_006890_050 Hb_006890_050 Hb_007885_120--Hb_006890_050 Hb_005054_010 Hb_005054_010 Hb_007885_120--Hb_005054_010 Hb_002639_120 Hb_002639_120 Hb_007885_120--Hb_002639_120 Hb_004659_110--Hb_002025_120 Hb_012395_260 Hb_012395_260 Hb_004659_110--Hb_012395_260 Hb_004007_190 Hb_004007_190 Hb_004659_110--Hb_004007_190 Hb_010267_030 Hb_010267_030 Hb_004659_110--Hb_010267_030 Hb_000201_070 Hb_000201_070 Hb_004659_110--Hb_000201_070 Hb_002025_120--Hb_004007_190 Hb_002025_120--Hb_002639_120 Hb_002025_120--Hb_012395_260 Hb_002422_010 Hb_002422_010 Hb_002025_120--Hb_002422_010 Hb_002025_120--Hb_000702_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.13808 0.0272036 1.67288 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0531725 0.128821

CAGE analysis