Hb_003032_010

Information

Type -
Description -
Location Contig3032: 17402-20595
Sequence    

Annotation

kegg
ID rcu:RCOM_0825430
description Nodulation receptor kinase precursor, putative (EC:2.7.11.26)
nr
ID XP_012078693.1
description PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
swissprot
ID O48788
description Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1
trembl
ID A0A067K7Y1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13261 PE=4 SV=1
Gene Ontology
ID GO:0005886
description probable inactive receptor kinase at2g26730

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31986: 17499-20611 , PASA_asmbl_31987: 19040-19510
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003032_010 0.0 - - PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
2 Hb_000069_110 0.1030326653 - - PREDICTED: nephrocystin-3-like isoform X2 [Jatropha curcas]
3 Hb_010655_010 0.1050323996 - - Cycloartenol synthase, putative [Ricinus communis]
4 Hb_002687_110 0.1082440547 - - PREDICTED: uncharacterized WD repeat-containing protein C343.04c isoform X1 [Jatropha curcas]
5 Hb_000479_200 0.1129540074 - - PREDICTED: uncharacterized protein LOC105644128 [Jatropha curcas]
6 Hb_032264_110 0.113522126 - - PREDICTED: uncharacterized protein LOC105648219 [Jatropha curcas]
7 Hb_017110_010 0.1145740917 transcription factor TF Family: TRAF PREDICTED: BTB/POZ domain-containing protein At1g55760 [Jatropha curcas]
8 Hb_003943_040 0.1150012443 - - DNA binding protein, putative [Ricinus communis]
9 Hb_000648_110 0.1150867895 - - PREDICTED: D-xylose-proton symporter-like 3, chloroplastic [Jatropha curcas]
10 Hb_000281_110 0.1177470766 - - PREDICTED: pumilio homolog 12 [Jatropha curcas]
11 Hb_004738_040 0.117917002 - - PREDICTED: serine/threonine-protein kinase EDR1-like isoform X2 [Populus euphratica]
12 Hb_000080_190 0.1182476409 - - -
13 Hb_001897_040 0.1190168872 - - 26S proteasome non-atpase regulatory subunit, putative [Ricinus communis]
14 Hb_004907_080 0.1194486968 - - zinc finger protein, putative [Ricinus communis]
15 Hb_000409_020 0.1208315134 - - PREDICTED: V-type proton ATPase subunit d2 [Jatropha curcas]
16 Hb_008300_010 0.1230128516 - - PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Jatropha curcas]
17 Hb_011316_040 0.1242322089 - - peptidase, putative [Ricinus communis]
18 Hb_132835_010 0.1244620529 - - PREDICTED: RING-H2 finger protein ATL8-like isoform X2 [Jatropha curcas]
19 Hb_000431_010 0.1266372002 - - hypothetical protein POPTR_0016s05340g [Populus trichocarpa]
20 Hb_001277_330 0.1279641225 - - PREDICTED: transmembrane emp24 domain-containing protein p24beta3 [Jatropha curcas]

Gene co-expression network

sample Hb_003032_010 Hb_003032_010 Hb_000069_110 Hb_000069_110 Hb_003032_010--Hb_000069_110 Hb_010655_010 Hb_010655_010 Hb_003032_010--Hb_010655_010 Hb_002687_110 Hb_002687_110 Hb_003032_010--Hb_002687_110 Hb_000479_200 Hb_000479_200 Hb_003032_010--Hb_000479_200 Hb_032264_110 Hb_032264_110 Hb_003032_010--Hb_032264_110 Hb_017110_010 Hb_017110_010 Hb_003032_010--Hb_017110_010 Hb_011867_010 Hb_011867_010 Hb_000069_110--Hb_011867_010 Hb_011316_040 Hb_011316_040 Hb_000069_110--Hb_011316_040 Hb_002609_020 Hb_002609_020 Hb_000069_110--Hb_002609_020 Hb_132835_010 Hb_132835_010 Hb_000069_110--Hb_132835_010 Hb_001277_330 Hb_001277_330 Hb_000069_110--Hb_001277_330 Hb_000510_320 Hb_000510_320 Hb_000069_110--Hb_000510_320 Hb_010655_010--Hb_132835_010 Hb_010655_010--Hb_032264_110 Hb_001090_040 Hb_001090_040 Hb_010655_010--Hb_001090_040 Hb_000451_010 Hb_000451_010 Hb_010655_010--Hb_000451_010 Hb_004440_090 Hb_004440_090 Hb_010655_010--Hb_004440_090 Hb_004907_080 Hb_004907_080 Hb_010655_010--Hb_004907_080 Hb_000431_010 Hb_000431_010 Hb_002687_110--Hb_000431_010 Hb_004738_040 Hb_004738_040 Hb_002687_110--Hb_004738_040 Hb_000080_190 Hb_000080_190 Hb_002687_110--Hb_000080_190 Hb_002687_110--Hb_001277_330 Hb_000409_020 Hb_000409_020 Hb_002687_110--Hb_000409_020 Hb_003943_040 Hb_003943_040 Hb_002687_110--Hb_003943_040 Hb_000479_200--Hb_003943_040 Hb_000479_200--Hb_017110_010 Hb_000479_200--Hb_011316_040 Hb_001975_140 Hb_001975_140 Hb_000479_200--Hb_001975_140 Hb_000173_290 Hb_000173_290 Hb_000479_200--Hb_000173_290 Hb_158467_010 Hb_158467_010 Hb_032264_110--Hb_158467_010 Hb_001009_270 Hb_001009_270 Hb_032264_110--Hb_001009_270 Hb_008300_010 Hb_008300_010 Hb_032264_110--Hb_008300_010 Hb_032264_110--Hb_000510_320 Hb_000656_040 Hb_000656_040 Hb_032264_110--Hb_000656_040 Hb_000629_120 Hb_000629_120 Hb_017110_010--Hb_000629_120 Hb_181288_020 Hb_181288_020 Hb_017110_010--Hb_181288_020 Hb_000161_060 Hb_000161_060 Hb_017110_010--Hb_000161_060 Hb_000138_110 Hb_000138_110 Hb_017110_010--Hb_000138_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
24.2187 4.84478 13.375 29.8422 41.0715 27.7552
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
34.0221 30.6864 53.7724 9.47395 16.9681

CAGE analysis