Hb_003044_030

Information

Type -
Description -
Location Contig3044: 22438-24302
Sequence    

Annotation

kegg
ID cam:101509252
description probable serine/threonine-protein kinase WNK11-like
nr
ID XP_004491590.1
description PREDICTED: probable serine/threonine-protein kinase WNK11 [Cicer arietinum]
swissprot
ID Q6ICW6
description Probable serine/threonine-protein kinase WNK11 OS=Arabidopsis thaliana GN=WNK11 PE=2 SV=1
trembl
ID I1JJR2
description Uncharacterized protein OS=Glycine max PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable serine threonine-protein kinase wnk11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32101: 22507-24235 , PASA_asmbl_32103: 25208-25493
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003044_030 0.0 - - PREDICTED: probable serine/threonine-protein kinase WNK11 [Cicer arietinum]
2 Hb_001021_080 0.1092245342 - - PREDICTED: autophagy-related protein 18a [Jatropha curcas]
3 Hb_000071_070 0.1164370379 - - PREDICTED: U-box domain-containing protein 33-like [Jatropha curcas]
4 Hb_000152_660 0.1194905228 - - PREDICTED: BAG family molecular chaperone regulator 7 [Jatropha curcas]
5 Hb_004064_010 0.1204156465 - - PREDICTED: uncharacterized protein LOC105133340 isoform X1 [Populus euphratica]
6 Hb_002028_220 0.1264479588 - - aminoadipic semialdehyde synthase, putative [Ricinus communis]
7 Hb_000402_190 0.127186267 - - PREDICTED: F-box protein At1g70590 [Jatropha curcas]
8 Hb_000062_070 0.1278159769 transcription factor TF Family: ARR-B two-component sensor histidine kinase bacteria, putative [Ricinus communis]
9 Hb_001123_320 0.1281776737 - - PREDICTED: uncharacterized protein LOC105647314 isoform X3 [Jatropha curcas]
10 Hb_109002_020 0.1285954531 - - PREDICTED: CTP synthase-like [Jatropha curcas]
11 Hb_003994_060 0.1313740328 - - PREDICTED: uncharacterized protein LOC105646110 isoform X3 [Jatropha curcas]
12 Hb_001269_140 0.13169436 - - PREDICTED: nuclear pore complex protein NUP96 [Jatropha curcas]
13 Hb_003266_100 0.1332748984 - - Isomerase protein [Gossypium arboreum]
14 Hb_001018_050 0.1345634734 - - PREDICTED: aspartate aminotransferase, cytoplasmic [Jatropha curcas]
15 Hb_006922_050 0.1350824938 - - PREDICTED: dipeptidyl peptidase 8 [Jatropha curcas]
16 Hb_002900_090 0.1352408505 transcription factor TF Family: MYB PREDICTED: uncharacterized protein LOC105646817 [Jatropha curcas]
17 Hb_001157_090 0.1365167244 - - PREDICTED: E3 ubiquitin-protein ligase SINAT2-like [Jatropha curcas]
18 Hb_000140_480 0.1370864934 - - PREDICTED: uncharacterized protein LOC105637350 [Jatropha curcas]
19 Hb_001221_430 0.1385695393 - - PREDICTED: F-box/LRR-repeat protein At5g63520 isoform X2 [Jatropha curcas]
20 Hb_002344_060 0.1405982363 - - PREDICTED: methylthioribose-1-phosphate isomerase [Jatropha curcas]

Gene co-expression network

sample Hb_003044_030 Hb_003044_030 Hb_001021_080 Hb_001021_080 Hb_003044_030--Hb_001021_080 Hb_000071_070 Hb_000071_070 Hb_003044_030--Hb_000071_070 Hb_000152_660 Hb_000152_660 Hb_003044_030--Hb_000152_660 Hb_004064_010 Hb_004064_010 Hb_003044_030--Hb_004064_010 Hb_002028_220 Hb_002028_220 Hb_003044_030--Hb_002028_220 Hb_000402_190 Hb_000402_190 Hb_003044_030--Hb_000402_190 Hb_172632_110 Hb_172632_110 Hb_001021_080--Hb_172632_110 Hb_008147_070 Hb_008147_070 Hb_001021_080--Hb_008147_070 Hb_002391_210 Hb_002391_210 Hb_001021_080--Hb_002391_210 Hb_000739_100 Hb_000739_100 Hb_001021_080--Hb_000739_100 Hb_006831_040 Hb_006831_040 Hb_001021_080--Hb_006831_040 Hb_001157_090 Hb_001157_090 Hb_001021_080--Hb_001157_090 Hb_009620_020 Hb_009620_020 Hb_000071_070--Hb_009620_020 Hb_000225_060 Hb_000225_060 Hb_000071_070--Hb_000225_060 Hb_000363_210 Hb_000363_210 Hb_000071_070--Hb_000363_210 Hb_008173_110 Hb_008173_110 Hb_000071_070--Hb_008173_110 Hb_050847_050 Hb_050847_050 Hb_000071_070--Hb_050847_050 Hb_001018_050 Hb_001018_050 Hb_000152_660--Hb_001018_050 Hb_002344_060 Hb_002344_060 Hb_000152_660--Hb_002344_060 Hb_000140_480 Hb_000140_480 Hb_000152_660--Hb_000140_480 Hb_000152_660--Hb_001157_090 Hb_000152_660--Hb_000739_100 Hb_000152_660--Hb_002391_210 Hb_003266_100 Hb_003266_100 Hb_004064_010--Hb_003266_100 Hb_105602_010 Hb_105602_010 Hb_004064_010--Hb_105602_010 Hb_000621_020 Hb_000621_020 Hb_004064_010--Hb_000621_020 Hb_109002_020 Hb_109002_020 Hb_004064_010--Hb_109002_020 Hb_001341_100 Hb_001341_100 Hb_004064_010--Hb_001341_100 Hb_001486_030 Hb_001486_030 Hb_004064_010--Hb_001486_030 Hb_004230_040 Hb_004230_040 Hb_002028_220--Hb_004230_040 Hb_001472_120 Hb_001472_120 Hb_002028_220--Hb_001472_120 Hb_000252_170 Hb_000252_170 Hb_002028_220--Hb_000252_170 Hb_002391_270 Hb_002391_270 Hb_002028_220--Hb_002391_270 Hb_006816_200 Hb_006816_200 Hb_002028_220--Hb_006816_200 Hb_007904_130 Hb_007904_130 Hb_000402_190--Hb_007904_130 Hb_000402_190--Hb_002391_210 Hb_003544_060 Hb_003544_060 Hb_000402_190--Hb_003544_060 Hb_000402_190--Hb_002344_060 Hb_000107_660 Hb_000107_660 Hb_000402_190--Hb_000107_660 Hb_010222_070 Hb_010222_070 Hb_000402_190--Hb_010222_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.34373 18.2263 9.43319 12.29 9.75104 9.1104
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.3384 13.246 14.8484 27.8695 2.59353

CAGE analysis