Hb_003050_210

Information

Type -
Description -
Location Contig3050: 194146-195888
Sequence    

Annotation

kegg
ID rcu:RCOM_0633200
description dopamine beta-monooxygenase, putative
nr
ID XP_011011549.1
description PREDICTED: cytochrome b561 domain-containing protein At4g18260-like [Populus euphratica]
swissprot
ID Q0WPS2
description Cytochrome b561 domain-containing protein At4g18260 OS=Arabidopsis thaliana GN=At4g18260 PE=2 SV=1
trembl
ID A0A067L0E0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04603 PE=4 SV=1
Gene Ontology
ID GO:0016021
description cytochrome b561 domain-containing protein at4g18260-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32149: 194533-195862
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003050_210 0.0 - - PREDICTED: cytochrome b561 domain-containing protein At4g18260-like [Populus euphratica]
2 Hb_000905_130 0.0783184278 - - PREDICTED: DNA-damage-repair/toleration protein DRT100 [Jatropha curcas]
3 Hb_000270_590 0.0823419919 - - hypothetical protein POPTR_0012s07820g [Populus trichocarpa]
4 Hb_006603_010 0.0889463023 - - neutral alpha-glucosidase ab precursor, putative [Ricinus communis]
5 Hb_006846_050 0.0977873792 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
6 Hb_000375_210 0.1030510836 - - -
7 Hb_002701_200 0.1057175962 - - PREDICTED: COBRA-like protein 4 [Jatropha curcas]
8 Hb_006889_010 0.1080625203 - - PREDICTED: agmatine coumaroyltransferase-2-like [Jatropha curcas]
9 Hb_006618_060 0.1085217019 - - PREDICTED: 21 kDa protein [Jatropha curcas]
10 Hb_000381_140 0.1098165045 - - PREDICTED: S-type anion channel SLAH4-like [Jatropha curcas]
11 Hb_007292_020 0.1111801081 - - Indole-3-acetic acid-amido synthetase GH3.6, putative [Ricinus communis]
12 Hb_005539_330 0.1118888452 - - PREDICTED: WAT1-related protein At2g39510-like [Jatropha curcas]
13 Hb_000622_140 0.113580174 - - conserved hypothetical protein [Ricinus communis]
14 Hb_085158_010 0.1143626693 transcription factor TF Family: C2H2 TRANSPARENT TESTA 1 protein, putative [Ricinus communis]
15 Hb_003152_010 0.115025826 - - -
16 Hb_002028_250 0.1159401411 - - Alpha-aminoadipic semialdehyde synthase, mitochondrial [Crassostrea gigas]
17 Hb_002757_020 0.1204565245 - - -
18 Hb_017524_020 0.1210856278 - - Rho GDP-dissociation inhibitor, putative [Ricinus communis]
19 Hb_000431_050 0.1211511777 - - conserved hypothetical protein [Ricinus communis]
20 Hb_007292_060 0.1217495575 - - PREDICTED: uncharacterized protein LOC105632853 [Jatropha curcas]

Gene co-expression network

sample Hb_003050_210 Hb_003050_210 Hb_000905_130 Hb_000905_130 Hb_003050_210--Hb_000905_130 Hb_000270_590 Hb_000270_590 Hb_003050_210--Hb_000270_590 Hb_006603_010 Hb_006603_010 Hb_003050_210--Hb_006603_010 Hb_006846_050 Hb_006846_050 Hb_003050_210--Hb_006846_050 Hb_000375_210 Hb_000375_210 Hb_003050_210--Hb_000375_210 Hb_002701_200 Hb_002701_200 Hb_003050_210--Hb_002701_200 Hb_000905_130--Hb_000270_590 Hb_000905_130--Hb_000375_210 Hb_000628_080 Hb_000628_080 Hb_000905_130--Hb_000628_080 Hb_000296_030 Hb_000296_030 Hb_000905_130--Hb_000296_030 Hb_000905_130--Hb_006846_050 Hb_000270_590--Hb_002701_200 Hb_000270_590--Hb_000296_030 Hb_000381_140 Hb_000381_140 Hb_000270_590--Hb_000381_140 Hb_017524_020 Hb_017524_020 Hb_000270_590--Hb_017524_020 Hb_006603_010--Hb_006846_050 Hb_006970_180 Hb_006970_180 Hb_006603_010--Hb_006970_180 Hb_006618_060 Hb_006618_060 Hb_006603_010--Hb_006618_060 Hb_151436_010 Hb_151436_010 Hb_006603_010--Hb_151436_010 Hb_085158_010 Hb_085158_010 Hb_006603_010--Hb_085158_010 Hb_006889_010 Hb_006889_010 Hb_006603_010--Hb_006889_010 Hb_006846_050--Hb_006618_060 Hb_006846_050--Hb_085158_010 Hb_002232_340 Hb_002232_340 Hb_006846_050--Hb_002232_340 Hb_006846_050--Hb_006970_180 Hb_006846_050--Hb_151436_010 Hb_002028_250 Hb_002028_250 Hb_000375_210--Hb_002028_250 Hb_002757_020 Hb_002757_020 Hb_000375_210--Hb_002757_020 Hb_000389_120 Hb_000389_120 Hb_000375_210--Hb_000389_120 Hb_000431_040 Hb_000431_040 Hb_000375_210--Hb_000431_040 Hb_014508_020 Hb_014508_020 Hb_000375_210--Hb_014508_020 Hb_002601_030 Hb_002601_030 Hb_000375_210--Hb_002601_030 Hb_002701_200--Hb_000628_080 Hb_002701_200--Hb_000905_130 Hb_001804_020 Hb_001804_020 Hb_002701_200--Hb_001804_020 Hb_001247_050 Hb_001247_050 Hb_002701_200--Hb_001247_050 Hb_002701_200--Hb_000296_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.155417 1.09237 14.8991 0.0560302 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0540495 0 0.19699 0.216692

CAGE analysis