Hb_003060_080

Information

Type -
Description -
Location Contig3060: 61173-62303
Sequence    

Annotation

kegg
ID tcc:TCM_005811
description Acyl-CoA sterol acyl transferase 1, putative
nr
ID XP_012065639.1
description PREDICTED: acyl-CoA--sterol O-acyltransferase 1 [Jatropha curcas]
swissprot
ID Q9SV07
description Acyl-CoA--sterol O-acyltransferase 1 OS=Arabidopsis thaliana GN=ASAT1 PE=1 SV=1
trembl
ID A0A061DVZ9
description Acyl-CoA sterol acyl transferase 1, putative OS=Theobroma cacao GN=TCM_005811 PE=4 SV=1
Gene Ontology
ID GO:0047196
description acyl- --sterol o-acyltransferase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32362: 61044-62413
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003060_080 0.0 - - PREDICTED: acyl-CoA--sterol O-acyltransferase 1 [Jatropha curcas]
2 Hb_006569_110 0.0829513386 - - conserved hypothetical protein [Ricinus communis]
3 Hb_007894_260 0.0936396139 - - receptor protein kinase, putative [Ricinus communis]
4 Hb_006970_100 0.0981889267 - - UDP-glucosyltransferase, putative [Ricinus communis]
5 Hb_006651_010 0.1096036591 - - PREDICTED: protein disulfide isomerase-like 1-4-like [Citrus sinensis]
6 Hb_025526_010 0.1109800904 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104452086 [Eucalyptus grandis]
7 Hb_006938_010 0.1164503457 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
8 Hb_132515_010 0.1203947972 - - phosphoprotein phosphatase, putative [Ricinus communis]
9 Hb_054865_030 0.1246497702 - - -
10 Hb_000661_230 0.1260726831 - - PREDICTED: zinc finger CCCH domain-containing protein 22-like isoform X2 [Jatropha curcas]
11 Hb_005116_010 0.1268287746 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]
12 Hb_006788_150 0.1296286225 - - conserved hypothetical protein [Ricinus communis]
13 Hb_009627_040 0.1301390921 - - Lipase class 3-related protein, putative [Theobroma cacao]
14 Hb_000254_150 0.1324279997 - - PREDICTED: homeobox-leucine zipper protein GLABRA 2 [Jatropha curcas]
15 Hb_008692_010 0.1325016178 - - putative polyol transported protein 2 [Hevea brasiliensis]
16 Hb_056101_010 0.1357434062 - - hypothetical protein POPTR_0391s00200g [Populus trichocarpa]
17 Hb_002928_220 0.1370853098 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
18 Hb_018212_020 0.1377242847 - - PREDICTED: uncharacterized protein LOC105636321 [Jatropha curcas]
19 Hb_004881_060 0.1387026125 transcription factor TF Family: WRKY hypothetical protein POPTR_0005s22480g [Populus trichocarpa]
20 Hb_000422_020 0.1390780617 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]

Gene co-expression network

sample Hb_003060_080 Hb_003060_080 Hb_006569_110 Hb_006569_110 Hb_003060_080--Hb_006569_110 Hb_007894_260 Hb_007894_260 Hb_003060_080--Hb_007894_260 Hb_006970_100 Hb_006970_100 Hb_003060_080--Hb_006970_100 Hb_006651_010 Hb_006651_010 Hb_003060_080--Hb_006651_010 Hb_025526_010 Hb_025526_010 Hb_003060_080--Hb_025526_010 Hb_006938_010 Hb_006938_010 Hb_003060_080--Hb_006938_010 Hb_006569_110--Hb_006938_010 Hb_006569_110--Hb_007894_260 Hb_000254_150 Hb_000254_150 Hb_006569_110--Hb_000254_150 Hb_002928_220 Hb_002928_220 Hb_006569_110--Hb_002928_220 Hb_006569_110--Hb_006970_100 Hb_007894_260--Hb_006938_010 Hb_000010_200 Hb_000010_200 Hb_007894_260--Hb_000010_200 Hb_000381_030 Hb_000381_030 Hb_007894_260--Hb_000381_030 Hb_000920_360 Hb_000920_360 Hb_007894_260--Hb_000920_360 Hb_006970_100--Hb_006651_010 Hb_007382_070 Hb_007382_070 Hb_006970_100--Hb_007382_070 Hb_006970_100--Hb_002928_220 Hb_033622_020 Hb_033622_020 Hb_006970_100--Hb_033622_020 Hb_006651_010--Hb_033622_020 Hb_006651_010--Hb_007382_070 Hb_135554_010 Hb_135554_010 Hb_006651_010--Hb_135554_010 Hb_001519_240 Hb_001519_240 Hb_006651_010--Hb_001519_240 Hb_006788_150 Hb_006788_150 Hb_025526_010--Hb_006788_150 Hb_056101_010 Hb_056101_010 Hb_025526_010--Hb_056101_010 Hb_000661_230 Hb_000661_230 Hb_025526_010--Hb_000661_230 Hb_000422_020 Hb_000422_020 Hb_025526_010--Hb_000422_020 Hb_004881_060 Hb_004881_060 Hb_025526_010--Hb_004881_060 Hb_001331_040 Hb_001331_040 Hb_006938_010--Hb_001331_040 Hb_006938_010--Hb_000381_030 Hb_006949_030 Hb_006949_030 Hb_006938_010--Hb_006949_030 Hb_002542_090 Hb_002542_090 Hb_006938_010--Hb_002542_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0713473 3.46366 0.772496 1.34669 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 11.16 3.32191

CAGE analysis