Hb_003060_150

Information

Type -
Description -
Location Contig3060: 141852-147705
Sequence    

Annotation

kegg
ID rcu:RCOM_1581890
description UDP-glucosyltransferase, putative (EC:2.4.1.218)
nr
ID XP_002513630.1
description UDP-glucosyltransferase, putative [Ricinus communis]
swissprot
ID Q9LK73
description UDP-glycosyltransferase 88A1 OS=Arabidopsis thaliana GN=UGT88A1 PE=2 SV=1
trembl
ID B9RIR1
description UDP-glucosyltransferase, putative OS=Ricinus communis GN=RCOM_1581890 PE=3 SV=1
Gene Ontology
ID GO:0016758
description udp-glycosyltransferase 88a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003060_150 0.0 - - UDP-glucosyltransferase, putative [Ricinus communis]
2 Hb_000069_530 0.0552406189 transcription factor TF Family: WRKY hypothetical protein POPTR_0014s09190g [Populus trichocarpa]
3 Hb_121540_010 0.0655507621 - - PREDICTED: UDP-glycosyltransferase 88A1-like [Jatropha curcas]
4 Hb_005381_010 0.0720660898 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH35 isoform X1 [Jatropha curcas]
5 Hb_028486_010 0.0909198267 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
6 Hb_001660_080 0.0957351209 - - hypothetical protein JCGZ_14829 [Jatropha curcas]
7 Hb_009252_090 0.0999453582 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
8 Hb_160653_010 0.1038275958 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
9 Hb_182167_010 0.1053403674 - - hypothetical protein PHAVU_001G0486001g, partial [Phaseolus vulgaris]
10 Hb_000172_410 0.1111238142 - - metal ion binding protein, putative [Ricinus communis]
11 Hb_001369_670 0.1120903275 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
12 Hb_012496_020 0.1153396588 - - receptor serine/threonine kinase, putative [Ricinus communis]
13 Hb_000592_070 0.116991519 - - PREDICTED: probable calcium-binding protein CML27 [Jatropha curcas]
14 Hb_001160_050 0.1170166145 - - PREDICTED: long-chain-alcohol oxidase FAO1 [Jatropha curcas]
15 Hb_000836_420 0.1173732264 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
16 Hb_077694_010 0.1187597068 - - uncharacterized protein LOC100305624 [Glycine max]
17 Hb_002374_030 0.1200316906 - - PREDICTED: probable receptor-like protein kinase At1g11050 isoform X1 [Jatropha curcas]
18 Hb_186995_010 0.1204955135 - - hypothetical protein POPTR_0012s01755g [Populus trichocarpa]
19 Hb_002133_010 0.1253666718 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Jatropha curcas]
20 Hb_006873_010 0.12688109 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]

Gene co-expression network

sample Hb_003060_150 Hb_003060_150 Hb_000069_530 Hb_000069_530 Hb_003060_150--Hb_000069_530 Hb_121540_010 Hb_121540_010 Hb_003060_150--Hb_121540_010 Hb_005381_010 Hb_005381_010 Hb_003060_150--Hb_005381_010 Hb_028486_010 Hb_028486_010 Hb_003060_150--Hb_028486_010 Hb_001660_080 Hb_001660_080 Hb_003060_150--Hb_001660_080 Hb_009252_090 Hb_009252_090 Hb_003060_150--Hb_009252_090 Hb_000069_530--Hb_005381_010 Hb_000069_530--Hb_121540_010 Hb_077694_010 Hb_077694_010 Hb_000069_530--Hb_077694_010 Hb_000592_070 Hb_000592_070 Hb_000069_530--Hb_000592_070 Hb_000069_530--Hb_001660_080 Hb_121540_010--Hb_005381_010 Hb_121540_010--Hb_028486_010 Hb_121540_010--Hb_077694_010 Hb_121540_010--Hb_001660_080 Hb_182167_010 Hb_182167_010 Hb_005381_010--Hb_182167_010 Hb_005381_010--Hb_001660_080 Hb_005381_010--Hb_077694_010 Hb_000087_200 Hb_000087_200 Hb_028486_010--Hb_000087_200 Hb_004109_240 Hb_004109_240 Hb_028486_010--Hb_004109_240 Hb_021254_020 Hb_021254_020 Hb_028486_010--Hb_021254_020 Hb_160653_010 Hb_160653_010 Hb_028486_010--Hb_160653_010 Hb_000836_420 Hb_000836_420 Hb_001660_080--Hb_000836_420 Hb_000035_140 Hb_000035_140 Hb_001660_080--Hb_000035_140 Hb_189208_060 Hb_189208_060 Hb_001660_080--Hb_189208_060 Hb_012400_020 Hb_012400_020 Hb_009252_090--Hb_012400_020 Hb_009252_090--Hb_000592_070 Hb_009252_090--Hb_000069_530 Hb_004551_010 Hb_004551_010 Hb_009252_090--Hb_004551_010 Hb_031266_020 Hb_031266_020 Hb_009252_090--Hb_031266_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 15.2179 18.4156 8.70385 0.0103143 0.00994458
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0234124 0 0 0.520514 1.86683

CAGE analysis