Hb_003090_050

Information

Type -
Description -
Location Contig3090: 40871-43089
Sequence    

Annotation

kegg
ID rcu:RCOM_0086620
description fructose-1,6-bisphosphatase, putative (EC:1.3.1.74)
nr
ID XP_002527886.1
description fructose-1,6-bisphosphatase, putative [Ricinus communis]
swissprot
ID P46275
description Fructose-1,6-bisphosphatase, chloroplastic OS=Pisum sativum GN=FBP PE=1 SV=2
trembl
ID B9SPG7
description Fructose-1,6-bisphosphatase, putative OS=Ricinus communis GN=RCOM_0086620 PE=3 SV=1
Gene Ontology
ID GO:0009570
description fructose- - chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32630: 40965-43009
cDNA
(Sanger)
(ID:Location)		 052_K21.ab1: 41983-42986

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003090_050 0.0 - - fructose-1,6-bisphosphatase, putative [Ricinus communis]
2 Hb_000841_040 0.0362042264 transcription factor TF Family: C2C2-CO-like transcription factor, putative [Ricinus communis]
3 Hb_000111_460 0.0436191033 - - PREDICTED: uncharacterized protein LOC105631266 [Jatropha curcas]
4 Hb_000923_030 0.0439091624 - - F-box family protein [Populus trichocarpa]
5 Hb_001287_070 0.0449635296 - - latex plastidic aldolase-like protein [Hevea brasiliensis]
6 Hb_008748_050 0.0475275254 - - PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Populus euphratica]
7 Hb_000010_380 0.0551139784 - - hypothetical protein CICLE_v10020897mg [Citrus clementina]
8 Hb_011381_120 0.0578371178 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Jatropha curcas]
9 Hb_011068_010 0.060991099 - - PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
10 Hb_001832_180 0.0611171489 transcription factor TF Family: C2C2-GATA hypothetical protein RCOM_1046780 [Ricinus communis]
11 Hb_004631_020 0.0617435565 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
12 Hb_001046_060 0.064631465 - - PREDICTED: UDP-glucose flavonoid 3-O-glucosyltransferase 7-like [Fragaria vesca subsp. vesca]
13 Hb_005000_120 0.0666207279 transcription factor TF Family: C2C2-GATA hypothetical protein RCOM_1046780 [Ricinus communis]
14 Hb_001104_080 0.0668606179 - - peroxiredoxin, putative [Ricinus communis]
15 Hb_002818_130 0.0676245587 - - cytochrome P450, putative [Ricinus communis]
16 Hb_000805_080 0.0679757508 - - PREDICTED: abscisic acid 8'-hydroxylase 2 isoform X2 [Jatropha curcas]
17 Hb_009093_020 0.0679765598 - - PREDICTED: uncharacterized protein LOC105642100 [Jatropha curcas]
18 Hb_032631_060 0.06814504 - - Myosin heavy chain, putative [Ricinus communis]
19 Hb_176135_010 0.0690915869 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
20 Hb_001310_020 0.0718499129 - - PREDICTED: cyclin-D5-1-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_003090_050 Hb_003090_050 Hb_000841_040 Hb_000841_040 Hb_003090_050--Hb_000841_040 Hb_000111_460 Hb_000111_460 Hb_003090_050--Hb_000111_460 Hb_000923_030 Hb_000923_030 Hb_003090_050--Hb_000923_030 Hb_001287_070 Hb_001287_070 Hb_003090_050--Hb_001287_070 Hb_008748_050 Hb_008748_050 Hb_003090_050--Hb_008748_050 Hb_000010_380 Hb_000010_380 Hb_003090_050--Hb_000010_380 Hb_009093_020 Hb_009093_020 Hb_000841_040--Hb_009093_020 Hb_000841_040--Hb_000111_460 Hb_011381_120 Hb_011381_120 Hb_000841_040--Hb_011381_120 Hb_001832_180 Hb_001832_180 Hb_000841_040--Hb_001832_180 Hb_004631_020 Hb_004631_020 Hb_000841_040--Hb_004631_020 Hb_000111_460--Hb_008748_050 Hb_000111_460--Hb_001287_070 Hb_005000_120 Hb_005000_120 Hb_000111_460--Hb_005000_120 Hb_000111_460--Hb_011381_120 Hb_001104_080 Hb_001104_080 Hb_000923_030--Hb_001104_080 Hb_000825_010 Hb_000825_010 Hb_000923_030--Hb_000825_010 Hb_000923_030--Hb_001287_070 Hb_000805_080 Hb_000805_080 Hb_000923_030--Hb_000805_080 Hb_000923_030--Hb_008748_050 Hb_011068_010 Hb_011068_010 Hb_001287_070--Hb_011068_010 Hb_001046_060 Hb_001046_060 Hb_001287_070--Hb_001046_060 Hb_001287_070--Hb_005000_120 Hb_001287_070--Hb_000805_080 Hb_001287_070--Hb_000010_380 Hb_086022_020 Hb_086022_020 Hb_008748_050--Hb_086022_020 Hb_176135_010 Hb_176135_010 Hb_008748_050--Hb_176135_010 Hb_000012_370 Hb_000012_370 Hb_008748_050--Hb_000012_370 Hb_000010_380--Hb_000805_080 Hb_000010_380--Hb_001046_060 Hb_032631_060 Hb_032631_060 Hb_000010_380--Hb_032631_060 Hb_000010_380--Hb_011068_010 Hb_003337_080 Hb_003337_080 Hb_000010_380--Hb_003337_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0158616 5.4589 99.7755 30.4743 0.0119545 0.0126592
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0581303 0.0686013 0 1.76018 311.932

CAGE analysis