Hb_003092_020

Information

Type -
Description -
Location Contig3092: 15443-18133
Sequence    

Annotation

kegg
ID tcc:TCM_038166
description Heptahelical transmembrane protein1 isoform 1
nr
ID XP_012081179.1
description PREDICTED: heptahelical transmembrane protein 1 [Jatropha curcas]
swissprot
ID Q93ZH9
description Heptahelical transmembrane protein 1 OS=Arabidopsis thaliana GN=HHP1 PE=1 SV=1
trembl
ID A0A067KEJ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17021 PE=4 SV=1
Gene Ontology
ID GO:0016021
description heptahelical transmembrane protein 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32667: 17416-17898
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003092_020 0.0 - - PREDICTED: heptahelical transmembrane protein 1 [Jatropha curcas]
2 Hb_026240_020 0.070841196 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At1g59780 [Jatropha curcas]
3 Hb_000365_430 0.0795081374 - - PREDICTED: BTB/POZ domain-containing protein At3g08570-like [Jatropha curcas]
4 Hb_004117_280 0.0867742808 - - hypothetical protein JCGZ_00361 [Jatropha curcas]
5 Hb_142026_010 0.0937480506 - - PREDICTED: probable mannitol dehydrogenase [Jatropha curcas]
6 Hb_000098_260 0.0949313471 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
7 Hb_003454_050 0.0972441284 - - PREDICTED: probable methyltransferase PMT14 [Jatropha curcas]
8 Hb_000163_180 0.0972583107 - - PREDICTED: UDP-glucuronic acid decarboxylase 2 [Jatropha curcas]
9 Hb_005892_040 0.10010021 - - hypothetical protein JCGZ_02368 [Jatropha curcas]
10 Hb_106089_010 0.1043543537 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
11 Hb_030982_050 0.104746631 - - PREDICTED: gamma-glutamyl hydrolase 2-like [Jatropha curcas]
12 Hb_002205_150 0.1069770715 - - RING-H2 finger protein ATL3C, putative [Ricinus communis]
13 Hb_001366_290 0.1075743306 - - Alpha-expansin 1 precursor, putative [Ricinus communis]
14 Hb_001638_150 0.1079197684 - - acyltransferase, putative [Ricinus communis]
15 Hb_001936_180 0.109277979 - - PREDICTED: protein NSP-INTERACTING KINASE 3 [Jatropha curcas]
16 Hb_001440_010 0.1096818494 - - PREDICTED: armadillo repeat-containing kinesin-like protein 1 [Populus euphratica]
17 Hb_004228_070 0.1110957949 - - PREDICTED: uncharacterized protein LOC103338699 [Prunus mume]
18 Hb_007290_050 0.1143385137 - - PREDICTED: uncharacterized protein LOC105629472 isoform X1 [Jatropha curcas]
19 Hb_001946_200 0.1155587673 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
20 Hb_004162_320 0.1163755945 - - PREDICTED: uncharacterized protein LOC105628009 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_003092_020 Hb_003092_020 Hb_026240_020 Hb_026240_020 Hb_003092_020--Hb_026240_020 Hb_000365_430 Hb_000365_430 Hb_003092_020--Hb_000365_430 Hb_004117_280 Hb_004117_280 Hb_003092_020--Hb_004117_280 Hb_142026_010 Hb_142026_010 Hb_003092_020--Hb_142026_010 Hb_000098_260 Hb_000098_260 Hb_003092_020--Hb_000098_260 Hb_003454_050 Hb_003454_050 Hb_003092_020--Hb_003454_050 Hb_000977_030 Hb_000977_030 Hb_026240_020--Hb_000977_030 Hb_005892_040 Hb_005892_040 Hb_026240_020--Hb_005892_040 Hb_026240_020--Hb_003454_050 Hb_005730_110 Hb_005730_110 Hb_026240_020--Hb_005730_110 Hb_003506_010 Hb_003506_010 Hb_026240_020--Hb_003506_010 Hb_009189_100 Hb_009189_100 Hb_000365_430--Hb_009189_100 Hb_001936_180 Hb_001936_180 Hb_000365_430--Hb_001936_180 Hb_007290_050 Hb_007290_050 Hb_000365_430--Hb_007290_050 Hb_000365_430--Hb_000098_260 Hb_000329_720 Hb_000329_720 Hb_000365_430--Hb_000329_720 Hb_004611_050 Hb_004611_050 Hb_004117_280--Hb_004611_050 Hb_002817_030 Hb_002817_030 Hb_004117_280--Hb_002817_030 Hb_002490_060 Hb_002490_060 Hb_004117_280--Hb_002490_060 Hb_000627_040 Hb_000627_040 Hb_004117_280--Hb_000627_040 Hb_000163_180 Hb_000163_180 Hb_004117_280--Hb_000163_180 Hb_002205_150 Hb_002205_150 Hb_142026_010--Hb_002205_150 Hb_002902_040 Hb_002902_040 Hb_142026_010--Hb_002902_040 Hb_019496_040 Hb_019496_040 Hb_142026_010--Hb_019496_040 Hb_106089_010 Hb_106089_010 Hb_142026_010--Hb_106089_010 Hb_142026_010--Hb_003454_050 Hb_142026_010--Hb_000163_180 Hb_092975_010 Hb_092975_010 Hb_000098_260--Hb_092975_010 Hb_002641_140 Hb_002641_140 Hb_000098_260--Hb_002641_140 Hb_000411_020 Hb_000411_020 Hb_000098_260--Hb_000411_020 Hb_000742_130 Hb_000742_130 Hb_000098_260--Hb_000742_130 Hb_000645_160 Hb_000645_160 Hb_000098_260--Hb_000645_160 Hb_003454_050--Hb_106089_010 Hb_003454_050--Hb_002205_150 Hb_004228_070 Hb_004228_070 Hb_003454_050--Hb_004228_070 Hb_003454_050--Hb_002902_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.78134 4.08468 4.46373 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.75058 2.33331

CAGE analysis