Hb_003095_090

Information

Type -
Description -
Location Contig3095: 60481-60720
Sequence    

Annotation

kegg
ID pop:POPTR_0004s15520g
description hypothetical protein
nr
ID KDP46189.1
description hypothetical protein JCGZ_10029 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LNY7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10029 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003095_090 0.0 - - hypothetical protein JCGZ_10029 [Jatropha curcas]
2 Hb_002374_500 0.2032721815 - - PREDICTED: putative F-box protein PP2-B12 [Gossypium raimondii]
3 Hb_005316_010 0.2266949305 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
4 Hb_000022_210 0.2284705399 - - PREDICTED: uncharacterized protein LOC105638395 [Jatropha curcas]
5 Hb_002671_070 0.2302465858 - - hypothetical protein POPTR_0006s05220g, partial [Populus trichocarpa]
6 Hb_005946_130 0.2302465858 - - -
7 Hb_001048_120 0.2306048226 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
8 Hb_070810_010 0.2313678186 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
9 Hb_005625_030 0.231403908 - - ribosomal protein S12 (mitochondrion) [Chrysobalanus icaco]
10 Hb_000705_320 0.2320749744 - - Transcriptional regulator SUPERMAN, putative [Ricinus communis]
11 Hb_000345_090 0.2326955197 - - Cell cycle checkpoint control protein family isoform 5 [Theobroma cacao]
12 Hb_027556_050 0.2328142084 - - hypothetical protein PHAVU_001G166100g [Phaseolus vulgaris]
13 Hb_080359_020 0.2328533942 - - hypothetical protein JCGZ_04985 [Jatropha curcas]
14 Hb_000724_010 0.2330222156 - - PREDICTED: uncharacterized protein LOC105134348 [Populus euphratica]
15 Hb_001031_100 0.2331470623 - - -
16 Hb_002596_100 0.2334051351 - - -
17 Hb_003687_050 0.2334393058 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000441_240 0.2335745669 - - hypothetical protein ZEAMMB73_005804 [Zea mays]
19 Hb_001031_070 0.2336225257 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase CES101 [Jatropha curcas]
20 Hb_071079_030 0.2337199277 transcription factor TF Family: MYB-related PREDICTED: transcription factor TRY-like [Populus euphratica]

Gene co-expression network

sample Hb_003095_090 Hb_003095_090 Hb_002374_500 Hb_002374_500 Hb_003095_090--Hb_002374_500 Hb_005316_010 Hb_005316_010 Hb_003095_090--Hb_005316_010 Hb_000022_210 Hb_000022_210 Hb_003095_090--Hb_000022_210 Hb_002671_070 Hb_002671_070 Hb_003095_090--Hb_002671_070 Hb_005946_130 Hb_005946_130 Hb_003095_090--Hb_005946_130 Hb_001048_120 Hb_001048_120 Hb_003095_090--Hb_001048_120 Hb_153470_010 Hb_153470_010 Hb_002374_500--Hb_153470_010 Hb_024898_020 Hb_024898_020 Hb_002374_500--Hb_024898_020 Hb_041362_010 Hb_041362_010 Hb_002374_500--Hb_041362_010 Hb_006655_040 Hb_006655_040 Hb_002374_500--Hb_006655_040 Hb_003626_010 Hb_003626_010 Hb_002374_500--Hb_003626_010 Hb_005316_010--Hb_002671_070 Hb_005316_010--Hb_005946_130 Hb_005316_010--Hb_001048_120 Hb_070810_010 Hb_070810_010 Hb_005316_010--Hb_070810_010 Hb_005625_030 Hb_005625_030 Hb_005316_010--Hb_005625_030 Hb_000705_320 Hb_000705_320 Hb_005316_010--Hb_000705_320 Hb_009398_010 Hb_009398_010 Hb_000022_210--Hb_009398_010 Hb_002289_030 Hb_002289_030 Hb_000022_210--Hb_002289_030 Hb_005204_060 Hb_005204_060 Hb_000022_210--Hb_005204_060 Hb_002094_060 Hb_002094_060 Hb_000022_210--Hb_002094_060 Hb_184964_010 Hb_184964_010 Hb_000022_210--Hb_184964_010 Hb_004324_140 Hb_004324_140 Hb_000022_210--Hb_004324_140 Hb_002671_070--Hb_005946_130 Hb_002671_070--Hb_001048_120 Hb_002671_070--Hb_070810_010 Hb_002671_070--Hb_005625_030 Hb_002671_070--Hb_000705_320 Hb_000345_090 Hb_000345_090 Hb_002671_070--Hb_000345_090 Hb_002671_070--Hb_005946_130 Hb_002671_070--Hb_001048_120 Hb_002671_070--Hb_070810_010 Hb_002671_070--Hb_005625_030 Hb_002671_070--Hb_000705_320 Hb_002671_070--Hb_000345_090 Hb_001048_120--Hb_005946_130 Hb_001048_120--Hb_070810_010 Hb_001048_120--Hb_005625_030 Hb_001048_120--Hb_000705_320 Hb_001048_120--Hb_000345_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 2.27972 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.569263 0 2.94437 0

CAGE analysis