Hb_003097_130

Information

Type -
Description -
Location Contig3097: 87842-89918
Sequence    

Annotation

kegg
ID rcu:RCOM_1453980
description hypothetical protein
nr
ID XP_002513117.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q8LPG9
description Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1
trembl
ID B9RGG5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1453980 PE=4 SV=1
Gene Ontology
ID GO:0005886
description protein iq-domain 14

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003097_130 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_021065_010 0.0726654783 - - PREDICTED: wall-associated receptor kinase 2-like isoform X2 [Gossypium raimondii]
3 Hb_005675_050 0.0942196306 - - alpha-glucosidase, putative [Ricinus communis]
4 Hb_004122_010 0.1157651062 - - PREDICTED: uncharacterized protein LOC105630923 [Jatropha curcas]
5 Hb_001287_090 0.1158359811 - - Endoglucanase 4 [Aegilops tauschii]
6 Hb_009767_060 0.1164813658 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
7 Hb_005181_170 0.1267502518 - - PREDICTED: aldehyde dehydrogenase 22A1 [Jatropha curcas]
8 Hb_000112_080 0.1285153805 - - PREDICTED: glutamate receptor 2.1-like [Populus euphratica]
9 Hb_002272_120 0.1297301654 - - PREDICTED: serine/threonine-protein kinase CDL1 [Jatropha curcas]
10 Hb_012518_080 0.1300004254 - - PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Jatropha curcas]
11 Hb_000418_170 0.1373514575 - - PREDICTED: ABC transporter C family member 12-like isoform X4 [Populus euphratica]
12 Hb_001396_030 0.1390101728 - - hypothetical protein POPTR_0001s13520g [Populus trichocarpa]
13 Hb_002045_010 0.1390586593 - - PREDICTED: F-box/LRR-repeat protein 17 [Jatropha curcas]
14 Hb_000847_130 0.1409571721 - - PREDICTED: fimbrin-2 [Jatropha curcas]
15 Hb_004330_040 0.1440848268 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000310_110 0.1446660435 - - PREDICTED: probable trehalose-phosphate phosphatase F isoform X1 [Jatropha curcas]
17 Hb_001279_240 0.1469448036 transcription factor TF Family: Orphans PREDICTED: uncharacterized protein LOC105633500 [Jatropha curcas]
18 Hb_032572_010 0.1471036036 - - PREDICTED: phospholipase A2-alpha [Jatropha curcas]
19 Hb_002805_180 0.1471866566 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000003_750 0.1471946747 - - PREDICTED: lysM domain receptor-like kinase 3 [Jatropha curcas]

Gene co-expression network

sample Hb_003097_130 Hb_003097_130 Hb_021065_010 Hb_021065_010 Hb_003097_130--Hb_021065_010 Hb_005675_050 Hb_005675_050 Hb_003097_130--Hb_005675_050 Hb_004122_010 Hb_004122_010 Hb_003097_130--Hb_004122_010 Hb_001287_090 Hb_001287_090 Hb_003097_130--Hb_001287_090 Hb_009767_060 Hb_009767_060 Hb_003097_130--Hb_009767_060 Hb_005181_170 Hb_005181_170 Hb_003097_130--Hb_005181_170 Hb_000418_170 Hb_000418_170 Hb_021065_010--Hb_000418_170 Hb_001247_150 Hb_001247_150 Hb_021065_010--Hb_001247_150 Hb_021065_010--Hb_005675_050 Hb_000527_050 Hb_000527_050 Hb_021065_010--Hb_000527_050 Hb_001085_190 Hb_001085_190 Hb_021065_010--Hb_001085_190 Hb_005675_050--Hb_004122_010 Hb_003666_070 Hb_003666_070 Hb_005675_050--Hb_003666_070 Hb_007632_160 Hb_007632_160 Hb_005675_050--Hb_007632_160 Hb_000739_170 Hb_000739_170 Hb_005675_050--Hb_000739_170 Hb_005675_050--Hb_000418_170 Hb_000297_210 Hb_000297_210 Hb_004122_010--Hb_000297_210 Hb_001514_030 Hb_001514_030 Hb_004122_010--Hb_001514_030 Hb_004122_010--Hb_007632_160 Hb_168918_010 Hb_168918_010 Hb_004122_010--Hb_168918_010 Hb_004122_010--Hb_005181_170 Hb_001287_090--Hb_009767_060 Hb_001396_030 Hb_001396_030 Hb_001287_090--Hb_001396_030 Hb_001541_130 Hb_001541_130 Hb_001287_090--Hb_001541_130 Hb_001287_090--Hb_168918_010 Hb_085962_010 Hb_085962_010 Hb_001287_090--Hb_085962_010 Hb_007811_020 Hb_007811_020 Hb_001287_090--Hb_007811_020 Hb_032572_010 Hb_032572_010 Hb_009767_060--Hb_032572_010 Hb_000303_060 Hb_000303_060 Hb_009767_060--Hb_000303_060 Hb_002045_010 Hb_002045_010 Hb_009767_060--Hb_002045_010 Hb_009767_060--Hb_004122_010 Hb_009767_060--Hb_001396_030 Hb_000112_080 Hb_000112_080 Hb_005181_170--Hb_000112_080 Hb_007218_040 Hb_007218_040 Hb_005181_170--Hb_007218_040 Hb_005181_170--Hb_000297_210 Hb_001140_300 Hb_001140_300 Hb_005181_170--Hb_001140_300 Hb_005181_170--Hb_001396_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.179017 2.57551 2.95322 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.205776 0.715771 1.37269

CAGE analysis