Hb_003106_210

Information

Type -
Description -
Location Contig3106: 151993-153815
Sequence    

Annotation

kegg
ID pop:POPTR_0015s08330g
description POPTRDRAFT_666418; UDP-glucoronosyl/UDP-glucosyl transferase family protein
nr
ID XP_012080127.1
description PREDICTED: UDP-glycosyltransferase 74B1-like [Jatropha curcas]
swissprot
ID O22820
description UDP-glycosyltransferase 74F1 OS=Arabidopsis thaliana GN=UGT74F1 PE=1 SV=1
trembl
ID A0A067K7Z6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11519 PE=4 SV=1
Gene Ontology
ID GO:0016758
description udp-glycosyltransferase 74b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32905: 152176-153803
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003106_210 0.0 - - PREDICTED: UDP-glycosyltransferase 74B1-like [Jatropha curcas]
2 Hb_001365_050 0.0947423011 - - hypothetical protein POPTR_0019s128601g, partial [Populus trichocarpa]
3 Hb_006316_030 0.1101219667 - - aldehyde oxidase, putative [Ricinus communis]
4 Hb_002218_070 0.1238401068 - - PREDICTED: myosin-binding protein 1 [Jatropha curcas]
5 Hb_006501_170 0.1314966131 - - hypothetical protein JCGZ_07371 [Jatropha curcas]
6 Hb_000067_030 0.1323303886 - - hypothetical protein JCGZ_04985 [Jatropha curcas]
7 Hb_107543_010 0.1362869971 - - Cysteine-rich RLK 10, putative [Theobroma cacao]
8 Hb_006718_040 0.1369083522 - - PREDICTED: starch synthase 3, chloroplastic/amyloplastic isoform X1 [Jatropha curcas]
9 Hb_004218_160 0.139988477 - - NBS-LRR type disease resistance protein [Medicago truncatula]
10 Hb_002518_270 0.1420119283 - - glycogen phosphorylase, putative [Ricinus communis]
11 Hb_002600_010 0.1431006827 - - Allene oxide cyclase 4, chloroplast precursor, putative [Ricinus communis]
12 Hb_007919_030 0.1433447085 - - -
13 Hb_001675_130 0.1458187836 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein GLABRA 2 [Jatropha curcas]
14 Hb_000086_370 0.1472931504 - - Long-chain-alcohol oxidase FAO2 [Triticum urartu]
15 Hb_000684_010 0.1473971548 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
16 Hb_043768_010 0.1475003833 - - PREDICTED: heat stress transcription factor A-4a-like [Jatropha curcas]
17 Hb_005542_110 0.1514503714 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01203 [Jatropha curcas]
18 Hb_002217_070 0.1529485894 - - PREDICTED: uncharacterized protein LOC105643596 [Jatropha curcas]
19 Hb_000377_160 0.1549701287 - - PREDICTED: oligopeptide transporter 3 [Jatropha curcas]
20 Hb_000563_120 0.155146013 - - hypothetical protein JCGZ_18936 [Jatropha curcas]

Gene co-expression network

sample Hb_003106_210 Hb_003106_210 Hb_001365_050 Hb_001365_050 Hb_003106_210--Hb_001365_050 Hb_006316_030 Hb_006316_030 Hb_003106_210--Hb_006316_030 Hb_002218_070 Hb_002218_070 Hb_003106_210--Hb_002218_070 Hb_006501_170 Hb_006501_170 Hb_003106_210--Hb_006501_170 Hb_000067_030 Hb_000067_030 Hb_003106_210--Hb_000067_030 Hb_107543_010 Hb_107543_010 Hb_003106_210--Hb_107543_010 Hb_001365_050--Hb_006316_030 Hb_043768_010 Hb_043768_010 Hb_001365_050--Hb_043768_010 Hb_001365_050--Hb_000067_030 Hb_007919_030 Hb_007919_030 Hb_001365_050--Hb_007919_030 Hb_000377_160 Hb_000377_160 Hb_001365_050--Hb_000377_160 Hb_038777_010 Hb_038777_010 Hb_006316_030--Hb_038777_010 Hb_001862_060 Hb_001862_060 Hb_006316_030--Hb_001862_060 Hb_001894_040 Hb_001894_040 Hb_006316_030--Hb_001894_040 Hb_001636_010 Hb_001636_010 Hb_006316_030--Hb_001636_010 Hb_001085_230 Hb_001085_230 Hb_006316_030--Hb_001085_230 Hb_001410_010 Hb_001410_010 Hb_002218_070--Hb_001410_010 Hb_117840_010 Hb_117840_010 Hb_002218_070--Hb_117840_010 Hb_000236_110 Hb_000236_110 Hb_002218_070--Hb_000236_110 Hb_002600_010 Hb_002600_010 Hb_002218_070--Hb_002600_010 Hb_008175_030 Hb_008175_030 Hb_002218_070--Hb_008175_030 Hb_002518_270 Hb_002518_270 Hb_006501_170--Hb_002518_270 Hb_004218_160 Hb_004218_160 Hb_006501_170--Hb_004218_160 Hb_008948_080 Hb_008948_080 Hb_006501_170--Hb_008948_080 Hb_003371_140 Hb_003371_140 Hb_006501_170--Hb_003371_140 Hb_011214_140 Hb_011214_140 Hb_006501_170--Hb_011214_140 Hb_003142_090 Hb_003142_090 Hb_000067_030--Hb_003142_090 Hb_000067_030--Hb_006501_170 Hb_006718_040 Hb_006718_040 Hb_000067_030--Hb_006718_040 Hb_001140_320 Hb_001140_320 Hb_000067_030--Hb_001140_320 Hb_000280_110 Hb_000280_110 Hb_107543_010--Hb_000280_110 Hb_046101_010 Hb_046101_010 Hb_107543_010--Hb_046101_010 Hb_107543_010--Hb_001894_040 Hb_009803_030 Hb_009803_030 Hb_107543_010--Hb_009803_030 Hb_000489_020 Hb_000489_020 Hb_107543_010--Hb_000489_020 Hb_074312_020 Hb_074312_020 Hb_107543_010--Hb_074312_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.166457 23.4499 3.80759 4.65263 0.182314 0.214993
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.62954 0.72043 0.551414 18.2243 9.5431

CAGE analysis