Hb_003124_120

Information

Type -
Description -
Location Contig3124: 49803-53403
Sequence    

Annotation

kegg
ID rcu:RCOM_0449370
description fructose-1,6-bisphosphatase, putative (EC:3.1.3.11)
nr
ID XP_012081371.1
description PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Jatropha curcas]
swissprot
ID P22418
description Fructose-1,6-bisphosphatase, chloroplastic OS=Spinacia oleracea PE=1 SV=2
trembl
ID B9T3E7
description Fructose-1,6-bisphosphatase, putative OS=Ricinus communis GN=RCOM_0449370 PE=3 SV=1
Gene Ontology
ID GO:0009570
description fructose- - chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33017: 49749-53411
cDNA
(Sanger)
(ID:Location)		 046_H12.ab1: 49749-51954

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003124_120 0.0 - - PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Jatropha curcas]
2 Hb_000816_200 0.069501612 - - 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis]
3 Hb_010128_020 0.0795582689 - - hypothetical protein POPTR_0001s24210g [Populus trichocarpa]
4 Hb_016461_030 0.0831839452 - - PREDICTED: putative leucine--tRNA ligase, mitochondrial isoform X1 [Jatropha curcas]
5 Hb_001677_220 0.083762051 - - PREDICTED: folylpolyglutamate synthase [Jatropha curcas]
6 Hb_000983_070 0.0842069319 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002075_030 0.0916843012 - - PREDICTED: glycerol-3-phosphate acyltransferase, chloroplastic [Jatropha curcas]
8 Hb_001890_010 0.0921521298 - - PREDICTED: clustered mitochondria protein homolog [Jatropha curcas]
9 Hb_001195_770 0.0923936175 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI2 [Jatropha curcas]
10 Hb_005305_020 0.0952533119 - - PREDICTED: dicarboxylate transporter 1, chloroplastic [Jatropha curcas]
11 Hb_000579_040 0.0972662015 - - PREDICTED: putative GTP-binding protein 6 [Jatropha curcas]
12 Hb_002671_130 0.0982479518 - - GTP-binding protein typa/bipa, putative [Ricinus communis]
13 Hb_008375_010 0.0997423421 - - PREDICTED: carbon catabolite repressor protein 4 homolog 4 isoform X3 [Pyrus x bretschneideri]
14 Hb_002150_020 0.101288477 - - PREDICTED: translation initiation factor IF-2, mitochondrial isoform X1 [Jatropha curcas]
15 Hb_029920_030 0.1018385372 - - PREDICTED: 2-Cys peroxiredoxin BAS1, chloroplastic-like [Jatropha curcas]
16 Hb_001009_260 0.1042780623 - - PREDICTED: uncharacterized aarF domain-containing protein kinase 1 isoform X1 [Jatropha curcas]
17 Hb_000640_260 0.1049313242 - - PREDICTED: pentatricopeptide repeat-containing protein At2g31400, chloroplastic [Jatropha curcas]
18 Hb_004111_030 0.1070792173 - - PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like [Jatropha curcas]
19 Hb_003029_020 0.1083307105 - - ATP-dependent Clp protease proteolytic subunit, putative [Ricinus communis]
20 Hb_001214_050 0.1089753366 - - PREDICTED: bifunctional monothiol glutaredoxin-S16, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_003124_120 Hb_003124_120 Hb_000816_200 Hb_000816_200 Hb_003124_120--Hb_000816_200 Hb_010128_020 Hb_010128_020 Hb_003124_120--Hb_010128_020 Hb_016461_030 Hb_016461_030 Hb_003124_120--Hb_016461_030 Hb_001677_220 Hb_001677_220 Hb_003124_120--Hb_001677_220 Hb_000983_070 Hb_000983_070 Hb_003124_120--Hb_000983_070 Hb_002075_030 Hb_002075_030 Hb_003124_120--Hb_002075_030 Hb_000816_200--Hb_016461_030 Hb_001195_770 Hb_001195_770 Hb_000816_200--Hb_001195_770 Hb_029920_030 Hb_029920_030 Hb_000816_200--Hb_029920_030 Hb_000189_450 Hb_000189_450 Hb_000816_200--Hb_000189_450 Hb_007441_310 Hb_007441_310 Hb_000816_200--Hb_007441_310 Hb_003029_020 Hb_003029_020 Hb_010128_020--Hb_003029_020 Hb_010128_020--Hb_000983_070 Hb_010128_020--Hb_002075_030 Hb_010128_020--Hb_000816_200 Hb_000112_060 Hb_000112_060 Hb_010128_020--Hb_000112_060 Hb_002282_070 Hb_002282_070 Hb_016461_030--Hb_002282_070 Hb_000345_370 Hb_000345_370 Hb_016461_030--Hb_000345_370 Hb_003777_020 Hb_003777_020 Hb_016461_030--Hb_003777_020 Hb_002542_160 Hb_002542_160 Hb_016461_030--Hb_002542_160 Hb_001427_040 Hb_001427_040 Hb_016461_030--Hb_001427_040 Hb_003142_010 Hb_003142_010 Hb_001677_220--Hb_003142_010 Hb_000032_500 Hb_000032_500 Hb_001677_220--Hb_000032_500 Hb_001677_220--Hb_000189_450 Hb_000008_350 Hb_000008_350 Hb_001677_220--Hb_000008_350 Hb_001677_220--Hb_000816_200 Hb_001898_180 Hb_001898_180 Hb_000983_070--Hb_001898_180 Hb_000983_070--Hb_000816_200 Hb_001629_090 Hb_001629_090 Hb_000983_070--Hb_001629_090 Hb_002053_010 Hb_002053_010 Hb_000983_070--Hb_002053_010 Hb_032631_070 Hb_032631_070 Hb_002075_030--Hb_032631_070 Hb_001307_100 Hb_001307_100 Hb_002075_030--Hb_001307_100 Hb_000579_040 Hb_000579_040 Hb_002075_030--Hb_000579_040 Hb_002075_030--Hb_007441_310 Hb_002075_030--Hb_003029_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.88231 4.29107 9.89538 6.56978 2.71054 3.08057
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.37956 4.40526 4.68851 6.53738 24.3258

CAGE analysis