Hb_003125_030

Information

Type -
Description -
Location Contig3125: 21864-23812
Sequence    

Annotation

kegg
ID rcu:RCOM_1506380
description Exocyst complex component, putative
nr
ID XP_012079843.1
description PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
swissprot
ID Q9LZD3
description Exocyst complex component EXO70A1 OS=Arabidopsis thaliana GN=EXO70A1 PE=1 SV=1
trembl
ID A0A067K471
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11298 PE=4 SV=1
Gene Ontology
ID GO:0000145
description exocyst complex component exo70b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33039: 21293-22078 , PASA_asmbl_33041: 23961-24060
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003125_030 0.0 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
2 Hb_104265_030 0.0984141964 - - hypothetical protein POPTR_0001s31230g [Populus trichocarpa]
3 Hb_012226_010 0.1006008977 - - PREDICTED: protein DGCR14 [Jatropha curcas]
4 Hb_003506_070 0.1015966714 - - PREDICTED: calcineurin B-like protein 7 isoform X2 [Jatropha curcas]
5 Hb_000540_120 0.1090957971 - - PREDICTED: probable serine/threonine-protein kinase RLCKVII [Jatropha curcas]
6 Hb_001525_010 0.1141069712 - - PREDICTED: uncharacterized protein LOC105638298 [Jatropha curcas]
7 Hb_000327_280 0.1185462818 - - PREDICTED: uncharacterized protein LOC105635045 isoform X1 [Jatropha curcas]
8 Hb_046117_010 0.1192578981 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Jatropha curcas]
9 Hb_001511_110 0.1229727671 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL2 isoform X2 [Jatropha curcas]
10 Hb_026198_040 0.1235304822 - - PREDICTED: uncharacterized protein LOC105628901 [Jatropha curcas]
11 Hb_000123_350 0.1257480659 desease resistance Gene Name: ABC_membrane ABC transporter family protein [Hevea brasiliensis]
12 Hb_004218_090 0.1269883977 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
13 Hb_155396_010 0.1280155343 - - TMV resistance protein N, putative [Ricinus communis]
14 Hb_000061_490 0.1305286086 - - hypothetical protein CISIN_1g0362002mg, partial [Citrus sinensis]
15 Hb_009771_100 0.1316431155 - - PREDICTED: uncharacterized protein LOC105141784 [Populus euphratica]
16 Hb_000465_080 0.1318349999 - - PREDICTED: E3 ubiquitin-protein ligase RBBP6-like [Jatropha curcas]
17 Hb_029223_050 0.1338152999 - - PREDICTED: uncharacterized protein LOC105642267 isoform X1 [Jatropha curcas]
18 Hb_116086_010 0.1345635265 - - hypothetical protein JCGZ_14829 [Jatropha curcas]
19 Hb_011909_060 0.1347015276 - - PREDICTED: zinc finger protein CONSTANS-LIKE 1 [Jatropha curcas]
20 Hb_000979_240 0.1365711783 transcription factor TF Family: GRAS PREDICTED: DELLA protein GAIP-B [Jatropha curcas]

Gene co-expression network

sample Hb_003125_030 Hb_003125_030 Hb_104265_030 Hb_104265_030 Hb_003125_030--Hb_104265_030 Hb_012226_010 Hb_012226_010 Hb_003125_030--Hb_012226_010 Hb_003506_070 Hb_003506_070 Hb_003125_030--Hb_003506_070 Hb_000540_120 Hb_000540_120 Hb_003125_030--Hb_000540_120 Hb_001525_010 Hb_001525_010 Hb_003125_030--Hb_001525_010 Hb_000327_280 Hb_000327_280 Hb_003125_030--Hb_000327_280 Hb_029223_050 Hb_029223_050 Hb_104265_030--Hb_029223_050 Hb_000123_350 Hb_000123_350 Hb_104265_030--Hb_000123_350 Hb_104265_030--Hb_012226_010 Hb_026198_040 Hb_026198_040 Hb_104265_030--Hb_026198_040 Hb_000896_060 Hb_000896_060 Hb_104265_030--Hb_000896_060 Hb_000340_110 Hb_000340_110 Hb_012226_010--Hb_000340_110 Hb_012226_010--Hb_029223_050 Hb_001511_110 Hb_001511_110 Hb_012226_010--Hb_001511_110 Hb_012226_010--Hb_026198_040 Hb_000465_080 Hb_000465_080 Hb_003506_070--Hb_000465_080 Hb_000540_110 Hb_000540_110 Hb_003506_070--Hb_000540_110 Hb_003506_070--Hb_001525_010 Hb_011909_060 Hb_011909_060 Hb_003506_070--Hb_011909_060 Hb_004218_090 Hb_004218_090 Hb_003506_070--Hb_004218_090 Hb_011465_030 Hb_011465_030 Hb_000540_120--Hb_011465_030 Hb_007403_050 Hb_007403_050 Hb_000540_120--Hb_007403_050 Hb_001189_130 Hb_001189_130 Hb_000540_120--Hb_001189_130 Hb_000140_070 Hb_000140_070 Hb_000540_120--Hb_000140_070 Hb_010831_020 Hb_010831_020 Hb_000540_120--Hb_010831_020 Hb_028207_040 Hb_028207_040 Hb_001525_010--Hb_028207_040 Hb_000953_050 Hb_000953_050 Hb_001525_010--Hb_000953_050 Hb_001525_010--Hb_000540_110 Hb_116086_010 Hb_116086_010 Hb_001525_010--Hb_116086_010 Hb_000189_100 Hb_000189_100 Hb_000327_280--Hb_000189_100 Hb_006663_040 Hb_006663_040 Hb_000327_280--Hb_006663_040 Hb_000120_660 Hb_000120_660 Hb_000327_280--Hb_000120_660 Hb_157966_010 Hb_157966_010 Hb_000327_280--Hb_157966_010 Hb_000832_320 Hb_000832_320 Hb_000327_280--Hb_000832_320 Hb_003729_030 Hb_003729_030 Hb_000327_280--Hb_003729_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
46.6438 114.207 18.6197 32.2214 30.861 36.4348
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
20.9287 11.0148 19.2355 15.3348 20.5828

CAGE analysis