Hb_003126_120

Information

Type -
Description -
Location Contig3126: 77605-79463
Sequence    

Annotation

kegg
ID pop:POPTR_0016s01210g
description POPTRDRAFT_824970; hypothetical protein
nr
ID XP_012078077.1
description PREDICTED: cytochrome b561 and DOMON domain-containing protein At5g47530-like [Jatropha curcas]
swissprot
ID Q9FGK4
description Cytochrome b561 and DOMON domain-containing protein At5g47530 OS=Arabidopsis thaliana GN=At5g47530 PE=2 SV=1
trembl
ID A0A067KKV5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13691 PE=4 SV=1
Gene Ontology
ID GO:0016021
description cytochrome b561 and domon domain-containing protein at5g47530-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33100: 78143-79443
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003126_120 0.0 - - PREDICTED: cytochrome b561 and DOMON domain-containing protein At5g47530-like [Jatropha curcas]
2 Hb_034688_030 0.0839442969 - - PREDICTED: uncharacterized protein LOC105642049 [Jatropha curcas]
3 Hb_002000_100 0.0995718184 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Jatropha curcas]
4 Hb_022693_090 0.1015204821 - - glycosyltransferase, putative [Ricinus communis]
5 Hb_011314_010 0.1073789758 - - PREDICTED: disease resistance protein RPS6-like isoform X1 [Jatropha curcas]
6 Hb_001360_020 0.1191053041 - - PREDICTED: S-adenosylmethionine synthase 1 [Nelumbo nucifera]
7 Hb_000367_320 0.1214625013 - - conserved hypothetical protein [Ricinus communis]
8 Hb_007403_100 0.1235274792 - - PREDICTED: probable purple acid phosphatase 20 [Jatropha curcas]
9 Hb_001775_060 0.1249102523 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000453_290 0.1265960455 - - PREDICTED: dr1-associated corepressor-like [Jatropha curcas]
11 Hb_142056_010 0.1271712013 - - PREDICTED: MATE efflux family protein 1 isoform X2 [Jatropha curcas]
12 Hb_002007_330 0.1278644848 - - PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Jatropha curcas]
13 Hb_002627_010 0.1313974017 - - PREDICTED: uncharacterized protein LOC105640888 [Jatropha curcas]
14 Hb_000638_230 0.1359932558 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
15 Hb_000152_520 0.1377301017 transcription factor TF Family: MYB hypothetical protein POPTR_0015s14600g [Populus trichocarpa]
16 Hb_010217_020 0.1377348135 - - cinnamate 4-hydroxylase [Leucaena leucocephala]
17 Hb_002592_070 0.1393574335 - - hypothetical protein VITISV_020993 [Vitis vinifera]
18 Hb_004785_170 0.1400768339 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
19 Hb_009225_070 0.1447934971 - - tonoplast intrinsic protein, putative [Ricinus communis]
20 Hb_002384_030 0.1450261618 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_003126_120 Hb_003126_120 Hb_034688_030 Hb_034688_030 Hb_003126_120--Hb_034688_030 Hb_002000_100 Hb_002000_100 Hb_003126_120--Hb_002000_100 Hb_022693_090 Hb_022693_090 Hb_003126_120--Hb_022693_090 Hb_011314_010 Hb_011314_010 Hb_003126_120--Hb_011314_010 Hb_001360_020 Hb_001360_020 Hb_003126_120--Hb_001360_020 Hb_000367_320 Hb_000367_320 Hb_003126_120--Hb_000367_320 Hb_002627_010 Hb_002627_010 Hb_034688_030--Hb_002627_010 Hb_001775_060 Hb_001775_060 Hb_034688_030--Hb_001775_060 Hb_002592_070 Hb_002592_070 Hb_034688_030--Hb_002592_070 Hb_034688_030--Hb_002000_100 Hb_000453_290 Hb_000453_290 Hb_034688_030--Hb_000453_290 Hb_002007_330 Hb_002007_330 Hb_002000_100--Hb_002007_330 Hb_142056_010 Hb_142056_010 Hb_002000_100--Hb_142056_010 Hb_002000_100--Hb_001360_020 Hb_007403_100 Hb_007403_100 Hb_002000_100--Hb_007403_100 Hb_008731_010 Hb_008731_010 Hb_002000_100--Hb_008731_010 Hb_002384_030 Hb_002384_030 Hb_002000_100--Hb_002384_030 Hb_022693_090--Hb_000453_290 Hb_022693_090--Hb_002384_030 Hb_009225_070 Hb_009225_070 Hb_022693_090--Hb_009225_070 Hb_022693_090--Hb_001360_020 Hb_022693_090--Hb_011314_010 Hb_022693_090--Hb_002592_070 Hb_011314_010--Hb_009225_070 Hb_004374_040 Hb_004374_040 Hb_011314_010--Hb_004374_040 Hb_004785_170 Hb_004785_170 Hb_011314_010--Hb_004785_170 Hb_003582_030 Hb_003582_030 Hb_011314_010--Hb_003582_030 Hb_001360_020--Hb_002384_030 Hb_001360_020--Hb_142056_010 Hb_001360_020--Hb_002007_330 Hb_001360_020--Hb_000453_290 Hb_001360_020--Hb_008731_010 Hb_005736_110 Hb_005736_110 Hb_000367_320--Hb_005736_110 Hb_000367_320--Hb_034688_030 Hb_000367_320--Hb_002000_100 Hb_000367_320--Hb_022693_090 Hb_000367_320--Hb_001360_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.13522 15.4065 2.50034 70.5497 0.0534716 0.0264097
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.25572 0.0502949 0 8.85588 14.8233

CAGE analysis