Hb_003144_050

Information

Type -
Description -
Location Contig3144: 71369-74702
Sequence    

Annotation

kegg
ID rcu:RCOM_0425800
description Auxin-induced protein 5NG4, putative
nr
ID XP_012075312.1
description PREDICTED: WAT1-related protein At5g64700 [Jatropha curcas]
swissprot
ID Q9FGG3
description WAT1-related protein At5g64700 OS=Arabidopsis thaliana GN=At5g64700 PE=2 SV=1
trembl
ID A0A067KU01
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09478 PE=4 SV=1
Gene Ontology
ID GO:0016021
description wat1-related protein at5g64700

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003144_050 0.0 - - PREDICTED: WAT1-related protein At5g64700 [Jatropha curcas]
2 Hb_173281_010 0.2118275909 - - Pectin lyase-like superfamily protein isoform 1 [Theobroma cacao]
3 Hb_148209_060 0.2183494473 - - PREDICTED: BURP domain-containing protein 3-like [Jatropha curcas]
4 Hb_000130_030 0.2224992148 - - PREDICTED: small ubiquitin-related modifier 2-A-like [Eucalyptus grandis]
5 Hb_088538_010 0.2243523841 - - hypothetical protein JCGZ_12177 [Jatropha curcas]
6 Hb_003286_020 0.2476897258 - - hypothetical protein POPTR_0007s05070g [Populus trichocarpa]
7 Hb_104000_010 0.2657287589 - - -
8 Hb_011909_110 0.2670986761 - - PREDICTED: uncharacterized protein LOC105633210 [Jatropha curcas]
9 Hb_002045_200 0.2681070698 - - PREDICTED: beta-carotene isomerase D27, chloroplastic [Jatropha curcas]
10 Hb_001902_120 0.2764753441 - - PREDICTED: uncharacterized protein LOC105648455 isoform X2 [Jatropha curcas]
11 Hb_001158_190 0.2765654311 - - PREDICTED: bidirectional sugar transporter SWEET10-like [Jatropha curcas]
12 Hb_052941_010 0.2793733139 - - PREDICTED: probable peroxidase 61 [Jatropha curcas]
13 Hb_005568_010 0.2813064227 - - -
14 Hb_002888_010 0.2854045837 - - -
15 Hb_000001_120 0.2862128676 - - hypothetical protein JCGZ_03063 [Jatropha curcas]
16 Hb_000545_170 0.2877131366 - - PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type isoform X2 [Jatropha curcas]
17 Hb_001959_130 0.2917094791 - - transporter, putative [Ricinus communis]
18 Hb_003913_140 0.2944698678 - - PREDICTED: uncharacterized protein LOC105640324 [Jatropha curcas]
19 Hb_053373_010 0.2976069659 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
20 Hb_028285_030 0.2976501662 - - PREDICTED: protein GLUTAMINE DUMPER 1-like [Elaeis guineensis]

Gene co-expression network

sample Hb_003144_050 Hb_003144_050 Hb_173281_010 Hb_173281_010 Hb_003144_050--Hb_173281_010 Hb_148209_060 Hb_148209_060 Hb_003144_050--Hb_148209_060 Hb_000130_030 Hb_000130_030 Hb_003144_050--Hb_000130_030 Hb_088538_010 Hb_088538_010 Hb_003144_050--Hb_088538_010 Hb_003286_020 Hb_003286_020 Hb_003144_050--Hb_003286_020 Hb_104000_010 Hb_104000_010 Hb_003144_050--Hb_104000_010 Hb_173281_010--Hb_003286_020 Hb_003913_140 Hb_003913_140 Hb_173281_010--Hb_003913_140 Hb_000749_240 Hb_000749_240 Hb_173281_010--Hb_000749_240 Hb_001741_040 Hb_001741_040 Hb_173281_010--Hb_001741_040 Hb_001902_120 Hb_001902_120 Hb_173281_010--Hb_001902_120 Hb_148209_060--Hb_088538_010 Hb_000545_170 Hb_000545_170 Hb_148209_060--Hb_000545_170 Hb_148209_060--Hb_003913_140 Hb_148209_060--Hb_001902_120 Hb_002045_200 Hb_002045_200 Hb_148209_060--Hb_002045_200 Hb_053373_010 Hb_053373_010 Hb_000130_030--Hb_053373_010 Hb_000130_030--Hb_002045_200 Hb_005616_030 Hb_005616_030 Hb_000130_030--Hb_005616_030 Hb_028285_030 Hb_028285_030 Hb_000130_030--Hb_028285_030 Hb_135585_010 Hb_135585_010 Hb_000130_030--Hb_135585_010 Hb_088538_010--Hb_000545_170 Hb_002450_070 Hb_002450_070 Hb_088538_010--Hb_002450_070 Hb_004218_210 Hb_004218_210 Hb_088538_010--Hb_004218_210 Hb_000453_300 Hb_000453_300 Hb_088538_010--Hb_000453_300 Hb_088538_010--Hb_002045_200 Hb_001780_070 Hb_001780_070 Hb_003286_020--Hb_001780_070 Hb_004800_020 Hb_004800_020 Hb_003286_020--Hb_004800_020 Hb_000175_610 Hb_000175_610 Hb_003286_020--Hb_000175_610 Hb_000235_010 Hb_000235_010 Hb_003286_020--Hb_000235_010 Hb_003286_020--Hb_000545_170 Hb_001930_090 Hb_001930_090 Hb_104000_010--Hb_001930_090 Hb_104000_010--Hb_173281_010 Hb_144484_010 Hb_144484_010 Hb_104000_010--Hb_144484_010 Hb_011909_110 Hb_011909_110 Hb_104000_010--Hb_011909_110 Hb_002043_120 Hb_002043_120 Hb_104000_010--Hb_002043_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0340607 0.0921543 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.77354 0.426223 1.07138 0 0.158791

CAGE analysis