Hb_003183_010

Information

Type -
Description -
Location Contig3183: 4076-5585
Sequence    

Annotation

kegg
ID sly:101260689
description uncharacterized LOC101260689
nr
ID XP_012466433.1
description PREDICTED: uncharacterized protein LOC105785048, partial [Gossypium raimondii]
swissprot
ID -
description -
trembl
ID A0A067LNH1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13470 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003183_010 0.0 - - PREDICTED: uncharacterized protein LOC105785048, partial [Gossypium raimondii]
2 Hb_129046_010 0.1482837179 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Elaeis guineensis]
3 Hb_001221_350 0.1532024664 - - conserved hypothetical protein [Ricinus communis]
4 Hb_028872_020 0.1867697425 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
5 Hb_002631_270 0.1920515574 transcription factor TF Family: MYB hypothetical protein POPTR_0005s09930g [Populus trichocarpa]
6 Hb_002447_100 0.1930821272 - - hypothetical protein POPTR_0009s06260g [Populus trichocarpa]
7 Hb_155423_010 0.2013118803 - - -
8 Hb_000567_270 0.2027807394 - - hypothetical protein L484_017162 [Morus notabilis]
9 Hb_003311_020 0.2249631501 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001102_120 0.2256060575 - - -
11 Hb_000100_110 0.2276758638 - - -
12 Hb_003994_070 0.2301707961 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
13 Hb_009851_090 0.2302399919 - - Protein ABIL2, putative [Ricinus communis]
14 Hb_001542_010 0.2323185722 - - hypothetical protein, partial [Pseudomonas fluorescens]
15 Hb_032016_010 0.2351149796 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like isoform X1 [Citrus sinensis]
16 Hb_151870_010 0.235474694 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
17 Hb_034197_020 0.2378644175 - - hypothetical protein VITISV_041099 [Vitis vinifera]
18 Hb_129420_010 0.240535474 transcription factor TF Family: NAC NAC transcription factor 059 [Jatropha curcas]
19 Hb_005920_030 0.2411656403 - - putative polyprotein [Oryza sativa Japonica Group]
20 Hb_001570_010 0.2419229685 - - -

Gene co-expression network

sample Hb_003183_010 Hb_003183_010 Hb_129046_010 Hb_129046_010 Hb_003183_010--Hb_129046_010 Hb_001221_350 Hb_001221_350 Hb_003183_010--Hb_001221_350 Hb_028872_020 Hb_028872_020 Hb_003183_010--Hb_028872_020 Hb_002631_270 Hb_002631_270 Hb_003183_010--Hb_002631_270 Hb_002447_100 Hb_002447_100 Hb_003183_010--Hb_002447_100 Hb_155423_010 Hb_155423_010 Hb_003183_010--Hb_155423_010 Hb_131320_010 Hb_131320_010 Hb_129046_010--Hb_131320_010 Hb_000975_260 Hb_000975_260 Hb_129046_010--Hb_000975_260 Hb_000169_100 Hb_000169_100 Hb_129046_010--Hb_000169_100 Hb_000675_040 Hb_000675_040 Hb_129046_010--Hb_000675_040 Hb_129046_010--Hb_002631_270 Hb_032016_010 Hb_032016_010 Hb_001221_350--Hb_032016_010 Hb_001221_350--Hb_028872_020 Hb_007533_050 Hb_007533_050 Hb_001221_350--Hb_007533_050 Hb_003073_030 Hb_003073_030 Hb_001221_350--Hb_003073_030 Hb_009851_090 Hb_009851_090 Hb_001221_350--Hb_009851_090 Hb_003462_170 Hb_003462_170 Hb_028872_020--Hb_003462_170 Hb_094484_010 Hb_094484_010 Hb_028872_020--Hb_094484_010 Hb_062192_050 Hb_062192_050 Hb_028872_020--Hb_062192_050 Hb_003427_040 Hb_003427_040 Hb_028872_020--Hb_003427_040 Hb_151870_010 Hb_151870_010 Hb_002631_270--Hb_151870_010 Hb_002631_270--Hb_155423_010 Hb_017225_030 Hb_017225_030 Hb_002631_270--Hb_017225_030 Hb_002631_270--Hb_009851_090 Hb_006807_010 Hb_006807_010 Hb_002631_270--Hb_006807_010 Hb_029727_010 Hb_029727_010 Hb_002631_270--Hb_029727_010 Hb_002447_100--Hb_155423_010 Hb_007590_030 Hb_007590_030 Hb_002447_100--Hb_007590_030 Hb_112791_030 Hb_112791_030 Hb_002447_100--Hb_112791_030 Hb_001542_010 Hb_001542_010 Hb_002447_100--Hb_001542_010 Hb_145080_010 Hb_145080_010 Hb_002447_100--Hb_145080_010 Hb_011358_010 Hb_011358_010 Hb_002447_100--Hb_011358_010 Hb_003994_070 Hb_003994_070 Hb_155423_010--Hb_003994_070 Hb_155423_010--Hb_009851_090 Hb_155423_010--Hb_151870_010 Hb_000567_270 Hb_000567_270 Hb_155423_010--Hb_000567_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.02411 0.0201276 0 0.0387487 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0700691 0.265469

CAGE analysis