Hb_003185_100

Information

Type -
Description -
Location Contig3185: 60936-68773
Sequence    

Annotation

kegg
ID rcu:RCOM_1053900
description Potassium channel AKT6, putative
nr
ID KDP33617.1
description hypothetical protein JCGZ_07188 [Jatropha curcas]
swissprot
ID Q8GXE6
description Potassium channel AKT6 OS=Arabidopsis thaliana GN=AKT6 PE=1 SV=2
trembl
ID A0A067KBU0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07188 PE=4 SV=1
Gene Ontology
ID GO:0005249
description potassium channel akt1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003185_100 0.0 - - hypothetical protein JCGZ_07188 [Jatropha curcas]
2 Hb_012760_110 0.1395319775 - - PREDICTED: methyltransferase-like protein 23 isoform X1 [Jatropha curcas]
3 Hb_000527_070 0.1776343798 transcription factor TF Family: SNF2 PREDICTED: uncharacterized protein LOC105649495 [Jatropha curcas]
4 Hb_001230_030 0.1817165254 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 isoform X2 [Populus euphratica]
5 Hb_000840_040 0.1864158036 - - monoxygenase, putative [Ricinus communis]
6 Hb_000340_290 0.1899955045 - - PREDICTED: piezo-type mechanosensitive ion channel homolog [Jatropha curcas]
7 Hb_001616_110 0.1940583003 - - PREDICTED: RPM1-interacting protein 4 [Jatropha curcas]
8 Hb_001195_730 0.1981738584 - - PREDICTED: protein LYK5-like [Jatropha curcas]
9 Hb_004319_060 0.2007431502 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
10 Hb_000141_010 0.2029524078 - - PREDICTED: uncharacterized protein LOC105632253 [Jatropha curcas]
11 Hb_012812_010 0.2075433091 - - putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Morus notabilis]
12 Hb_002291_020 0.2078331082 - - PREDICTED: glutamate synthase 1 [NADH], chloroplastic isoform X1 [Jatropha curcas]
13 Hb_027760_090 0.2084613325 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
14 Hb_114684_010 0.2088417333 - - PREDICTED: seed maturation protein PM36 [Jatropha curcas]
15 Hb_000001_130 0.2095350213 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
16 Hb_000331_510 0.2106583864 - - PREDICTED: peroxisome biogenesis factor 10-like [Jatropha curcas]
17 Hb_000205_250 0.2113938896 - - PREDICTED: uncharacterized protein LOC105647762 [Jatropha curcas]
18 Hb_012098_170 0.2134980813 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_16874 [Jatropha curcas]
19 Hb_000227_330 0.2151982635 - - Acyl-CoA synthetase [Ricinus communis]
20 Hb_003835_100 0.2158435555 - - PREDICTED: putative U-box domain-containing protein 50 [Jatropha curcas]

Gene co-expression network

sample Hb_003185_100 Hb_003185_100 Hb_012760_110 Hb_012760_110 Hb_003185_100--Hb_012760_110 Hb_000527_070 Hb_000527_070 Hb_003185_100--Hb_000527_070 Hb_001230_030 Hb_001230_030 Hb_003185_100--Hb_001230_030 Hb_000840_040 Hb_000840_040 Hb_003185_100--Hb_000840_040 Hb_000340_290 Hb_000340_290 Hb_003185_100--Hb_000340_290 Hb_001616_110 Hb_001616_110 Hb_003185_100--Hb_001616_110 Hb_000215_360 Hb_000215_360 Hb_012760_110--Hb_000215_360 Hb_000001_130 Hb_000001_130 Hb_012760_110--Hb_000001_130 Hb_000204_070 Hb_000204_070 Hb_012760_110--Hb_000204_070 Hb_073171_100 Hb_073171_100 Hb_012760_110--Hb_073171_100 Hb_001691_200 Hb_001691_200 Hb_012760_110--Hb_001691_200 Hb_000141_010 Hb_000141_010 Hb_000527_070--Hb_000141_010 Hb_000527_140 Hb_000527_140 Hb_000527_070--Hb_000527_140 Hb_114684_010 Hb_114684_010 Hb_000527_070--Hb_114684_010 Hb_000847_020 Hb_000847_020 Hb_000527_070--Hb_000847_020 Hb_000345_340 Hb_000345_340 Hb_000527_070--Hb_000345_340 Hb_073973_020 Hb_073973_020 Hb_000527_070--Hb_073973_020 Hb_012812_010 Hb_012812_010 Hb_001230_030--Hb_012812_010 Hb_001230_030--Hb_000340_290 Hb_002400_160 Hb_002400_160 Hb_001230_030--Hb_002400_160 Hb_000684_050 Hb_000684_050 Hb_001230_030--Hb_000684_050 Hb_001488_040 Hb_001488_040 Hb_001230_030--Hb_001488_040 Hb_000331_510 Hb_000331_510 Hb_001230_030--Hb_000331_510 Hb_149515_010 Hb_149515_010 Hb_000840_040--Hb_149515_010 Hb_000840_040--Hb_000141_010 Hb_159198_010 Hb_159198_010 Hb_000840_040--Hb_159198_010 Hb_002043_010 Hb_002043_010 Hb_000840_040--Hb_002043_010 Hb_001485_010 Hb_001485_010 Hb_000840_040--Hb_001485_010 Hb_007012_040 Hb_007012_040 Hb_000340_290--Hb_007012_040 Hb_014006_010 Hb_014006_010 Hb_000340_290--Hb_014006_010 Hb_003124_270 Hb_003124_270 Hb_000340_290--Hb_003124_270 Hb_000805_190 Hb_000805_190 Hb_000340_290--Hb_000805_190 Hb_001956_060 Hb_001956_060 Hb_000340_290--Hb_001956_060 Hb_000154_130 Hb_000154_130 Hb_000340_290--Hb_000154_130 Hb_027654_080 Hb_027654_080 Hb_001616_110--Hb_027654_080 Hb_002343_010 Hb_002343_010 Hb_001616_110--Hb_002343_010 Hb_002766_050 Hb_002766_050 Hb_001616_110--Hb_002766_050 Hb_001616_110--Hb_000340_290 Hb_000920_130 Hb_000920_130 Hb_001616_110--Hb_000920_130 Hb_001959_120 Hb_001959_120 Hb_001616_110--Hb_001959_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.288208 0.0791062 0.0487263 0.0211925 0.0336166
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0502142 0.079027 0.0754034 0.235281 0.196194

CAGE analysis