Hb_003189_030

Information

Type -
Description -
Location Contig3189: 21902-28910
Sequence    

Annotation

kegg
ID rcu:RCOM_0731940
description glutathione s-transferase, putative (EC:4.4.1.5)
nr
ID KGN54329.1
description hypothetical protein Csa_4G304750 [Cucumis sativus]
swissprot
ID -
description -
trembl
ID A0A0A0KZT5
description Uncharacterized protein OS=Cucumis sativus GN=Csa_4G304750 PE=3 SV=1
Gene Ontology
ID GO:0005515
description probable glutathione s-transferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003189_030 0.0 - - hypothetical protein Csa_4G304750 [Cucumis sativus]
2 Hb_035726_020 0.0655887728 - - Insulinase (Peptidase family M16) family protein [Theobroma cacao]
3 Hb_001003_020 0.0678798142 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
4 Hb_000466_090 0.0847659282 - - PREDICTED: E3 ubiquitin-protein ligase RGLG2-like isoform X1 [Jatropha curcas]
5 Hb_002173_080 0.0908921267 - - alcohol dehydrogenase, putative [Ricinus communis]
6 Hb_006620_040 0.0998811875 - - PREDICTED: probable 6-phosphogluconolactonase 1 [Jatropha curcas]
7 Hb_000659_010 0.1008819798 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
8 Hb_039562_010 0.1060939915 - - PREDICTED: protein SRG1-like [Jatropha curcas]
9 Hb_022815_020 0.1181686529 - - PREDICTED: uncharacterized protein LOC105650107 [Jatropha curcas]
10 Hb_004222_010 0.1200603509 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
11 Hb_135392_010 0.1217721244 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
12 Hb_000487_150 0.1268114708 - - PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Jatropha curcas]
13 Hb_035726_010 0.1359776862 - - Insulin-degrading enzyme, putative [Ricinus communis]
14 Hb_000318_440 0.1374986656 - - PREDICTED: allene oxide synthase 2-like [Jatropha curcas]
15 Hb_003968_020 0.1381152562 - - PREDICTED: limonoid UDP-glucosyltransferase-like [Glycine max]
16 Hb_023732_020 0.1394144283 - - PREDICTED: fatty acyl-CoA reductase 3-like [Jatropha curcas]
17 Hb_007417_020 0.1405620217 - - Reticuline oxidase precursor, putative [Ricinus communis]
18 Hb_097908_010 0.141403453 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X2 [Jatropha curcas]
19 Hb_073171_020 0.1417604069 - - PREDICTED: ABC transporter G family member 29-like [Jatropha curcas]
20 Hb_007491_010 0.1420269133 - - Spotted leaf protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_003189_030 Hb_003189_030 Hb_035726_020 Hb_035726_020 Hb_003189_030--Hb_035726_020 Hb_001003_020 Hb_001003_020 Hb_003189_030--Hb_001003_020 Hb_000466_090 Hb_000466_090 Hb_003189_030--Hb_000466_090 Hb_002173_080 Hb_002173_080 Hb_003189_030--Hb_002173_080 Hb_006620_040 Hb_006620_040 Hb_003189_030--Hb_006620_040 Hb_000659_010 Hb_000659_010 Hb_003189_030--Hb_000659_010 Hb_035726_020--Hb_001003_020 Hb_022815_020 Hb_022815_020 Hb_035726_020--Hb_022815_020 Hb_033843_020 Hb_033843_020 Hb_035726_020--Hb_033843_020 Hb_035726_010 Hb_035726_010 Hb_035726_020--Hb_035726_010 Hb_035726_020--Hb_000659_010 Hb_001003_020--Hb_000659_010 Hb_001003_020--Hb_022815_020 Hb_004222_010 Hb_004222_010 Hb_001003_020--Hb_004222_010 Hb_001003_020--Hb_033843_020 Hb_000466_090--Hb_006620_040 Hb_000466_090--Hb_002173_080 Hb_000466_090--Hb_000659_010 Hb_000487_150 Hb_000487_150 Hb_000466_090--Hb_000487_150 Hb_000466_090--Hb_001003_020 Hb_039562_010 Hb_039562_010 Hb_002173_080--Hb_039562_010 Hb_002173_080--Hb_000487_150 Hb_003237_040 Hb_003237_040 Hb_002173_080--Hb_003237_040 Hb_000318_440 Hb_000318_440 Hb_002173_080--Hb_000318_440 Hb_004097_080 Hb_004097_080 Hb_002173_080--Hb_004097_080 Hb_003968_020 Hb_003968_020 Hb_006620_040--Hb_003968_020 Hb_006620_040--Hb_039562_010 Hb_023080_010 Hb_023080_010 Hb_006620_040--Hb_023080_010 Hb_000907_190 Hb_000907_190 Hb_006620_040--Hb_000907_190 Hb_000659_010--Hb_022815_020 Hb_175968_010 Hb_175968_010 Hb_000659_010--Hb_175968_010 Hb_000659_010--Hb_004222_010 Hb_001279_220 Hb_001279_220 Hb_000659_010--Hb_001279_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.129282 0.198573 0.351143 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 11.7129 1.12791

CAGE analysis