Hb_003205_040

Information

Type -
Description -
Location Contig3205: 37387-38471
Sequence    

Annotation

kegg
ID rcu:RCOM_1178720
description epoxide hydrolase, putative (EC:2.7.10.2)
nr
ID XP_002523108.1
description epoxide hydrolase, putative [Ricinus communis]
swissprot
ID P34913
description Bifunctional epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2
trembl
ID B9SAT9
description Epoxide hydrolase, putative OS=Ricinus communis GN=RCOM_1178720 PE=4 SV=1
Gene Ontology
ID GO:0005777
description bifunctional epoxide hydrolase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33855: 37444-38076
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003205_040 0.0 - - epoxide hydrolase, putative [Ricinus communis]
2 Hb_085793_010 0.0022415055 - - PREDICTED: uncharacterized protein LOC105634453 [Jatropha curcas]
3 Hb_000043_040 0.0425410717 - - CTV.19 [Citrus trifoliata]
4 Hb_066206_010 0.101970924 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
5 Hb_165100_010 0.1151700951 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
6 Hb_000574_290 0.1185829697 - - PREDICTED: uncharacterized protein LOC105629978 [Jatropha curcas]
7 Hb_028248_010 0.2190509486 - - polyprotein [Oryza australiensis]
8 Hb_020250_020 0.2541394012 - - PREDICTED: uncharacterized protein LOC105775392, partial [Gossypium raimondii]
9 Hb_097889_010 0.2663686087 - - PREDICTED: uncharacterized protein LOC102584707 [Solanum tuberosum]
10 Hb_011537_090 0.266368909 - - hypothetical protein B456_009G071100 [Gossypium raimondii]
11 Hb_009188_010 0.2664039827 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
12 Hb_008976_010 0.2664311211 - - -
13 Hb_000710_120 0.2664399389 - - hypothetical protein JCGZ_01844 [Jatropha curcas]
14 Hb_001309_030 0.2664460227 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
15 Hb_004019_100 0.2664493786 - - PREDICTED: uncharacterized protein LOC105797448 [Gossypium raimondii]
16 Hb_001972_020 0.2664687943 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
17 Hb_001817_190 0.266473408 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
18 Hb_010783_010 0.2664764654 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
19 Hb_124540_020 0.2666720951 - - polyprotein [Citrus endogenous pararetrovirus]
20 Hb_090778_010 0.266728876 - - PREDICTED: uncharacterized protein LOC105764482 [Gossypium raimondii]

Gene co-expression network

sample Hb_003205_040 Hb_003205_040 Hb_085793_010 Hb_085793_010 Hb_003205_040--Hb_085793_010 Hb_000043_040 Hb_000043_040 Hb_003205_040--Hb_000043_040 Hb_066206_010 Hb_066206_010 Hb_003205_040--Hb_066206_010 Hb_165100_010 Hb_165100_010 Hb_003205_040--Hb_165100_010 Hb_000574_290 Hb_000574_290 Hb_003205_040--Hb_000574_290 Hb_028248_010 Hb_028248_010 Hb_003205_040--Hb_028248_010 Hb_085793_010--Hb_000043_040 Hb_085793_010--Hb_066206_010 Hb_085793_010--Hb_165100_010 Hb_085793_010--Hb_000574_290 Hb_085793_010--Hb_028248_010 Hb_000043_040--Hb_066206_010 Hb_000043_040--Hb_000574_290 Hb_000043_040--Hb_165100_010 Hb_000043_040--Hb_028248_010 Hb_066206_010--Hb_000574_290 Hb_066206_010--Hb_165100_010 Hb_066206_010--Hb_028248_010 Hb_165100_010--Hb_000574_290 Hb_165100_010--Hb_028248_010 Hb_000574_290--Hb_028248_010 Hb_011716_120 Hb_011716_120 Hb_028248_010--Hb_011716_120 Hb_017225_010 Hb_017225_010 Hb_028248_010--Hb_017225_010 Hb_011987_010 Hb_011987_010 Hb_028248_010--Hb_011987_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.0251046 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0181986 0.0916386

CAGE analysis