Hb_003207_050

Information

Type -
Description -
Location Contig3207: 26773-41809
Sequence    

Annotation

kegg
ID rcu:RCOM_1683030
description Cucumisin precursor, putative (EC:3.4.21.25)
nr
ID XP_012087249.1
description PREDICTED: cucumisin-like [Jatropha curcas]
swissprot
ID Q39547
description Cucumisin OS=Cucumis melo PE=1 SV=1
trembl
ID A0A067K1K2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20815 PE=4 SV=1
Gene Ontology
ID GO:0004252
description cucumisin-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003207_050 0.0 - - PREDICTED: cucumisin-like [Jatropha curcas]
2 Hb_003020_200 0.2315802957 - - PREDICTED: uncharacterized protein LOC105131117 [Populus euphratica]
3 Hb_002192_040 0.2377171744 - - -
4 Hb_057343_010 0.2465535063 - - hypothetical protein JCGZ_23164 [Jatropha curcas]
5 Hb_172426_020 0.2617931186 - - PREDICTED: putative fasciclin-like arabinogalactan protein 20 [Jatropha curcas]
6 Hb_000574_310 0.2670918035 - - hypothetical protein CISIN_1g027539mg [Citrus sinensis]
7 Hb_000577_060 0.2694742846 - - -
8 Hb_001174_040 0.2704654651 - - -
9 Hb_000617_070 0.2718253845 - - hypothetical protein POPTR_0005s02420g [Populus trichocarpa]
10 Hb_000614_310 0.2724000489 - - conserved hypothetical protein [Ricinus communis]
11 Hb_009486_030 0.2731350728 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 12 [Jatropha curcas]
12 Hb_011169_010 0.2758108861 - - mta/sah nucleosidase, putative [Ricinus communis]
13 Hb_002073_160 0.2809352916 - - hypothetical protein JCGZ_21740 [Jatropha curcas]
14 Hb_000753_270 0.2828832831 - - -
15 Hb_000115_210 0.2854030618 transcription factor TF Family: bHLH PREDICTED: transcription factor BEE 3-like [Jatropha curcas]
16 Hb_000193_130 0.2861390877 - - nucleic acid binding protein, putative [Ricinus communis]
17 Hb_005841_070 0.2877140205 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000617_300 0.2883080331 - - RALFL33, putative [Ricinus communis]
19 Hb_105885_010 0.2887052043 - - PREDICTED: uncharacterized protein LOC103441690 [Malus domestica]
20 Hb_001141_260 0.2901204744 - - Uncharacterized protein TCM_020647 [Theobroma cacao]

Gene co-expression network

sample Hb_003207_050 Hb_003207_050 Hb_003020_200 Hb_003020_200 Hb_003207_050--Hb_003020_200 Hb_002192_040 Hb_002192_040 Hb_003207_050--Hb_002192_040 Hb_057343_010 Hb_057343_010 Hb_003207_050--Hb_057343_010 Hb_172426_020 Hb_172426_020 Hb_003207_050--Hb_172426_020 Hb_000574_310 Hb_000574_310 Hb_003207_050--Hb_000574_310 Hb_000577_060 Hb_000577_060 Hb_003207_050--Hb_000577_060 Hb_011169_010 Hb_011169_010 Hb_003020_200--Hb_011169_010 Hb_000617_300 Hb_000617_300 Hb_003020_200--Hb_000617_300 Hb_004657_070 Hb_004657_070 Hb_003020_200--Hb_004657_070 Hb_007311_050 Hb_007311_050 Hb_003020_200--Hb_007311_050 Hb_102772_010 Hb_102772_010 Hb_003020_200--Hb_102772_010 Hb_000622_190 Hb_000622_190 Hb_003020_200--Hb_000622_190 Hb_001335_040 Hb_001335_040 Hb_002192_040--Hb_001335_040 Hb_012565_010 Hb_012565_010 Hb_002192_040--Hb_012565_010 Hb_019053_050 Hb_019053_050 Hb_002192_040--Hb_019053_050 Hb_011900_040 Hb_011900_040 Hb_002192_040--Hb_011900_040 Hb_002192_040--Hb_000617_300 Hb_000617_070 Hb_000617_070 Hb_002192_040--Hb_000617_070 Hb_000193_130 Hb_000193_130 Hb_057343_010--Hb_000193_130 Hb_004449_100 Hb_004449_100 Hb_057343_010--Hb_004449_100 Hb_009767_040 Hb_009767_040 Hb_057343_010--Hb_009767_040 Hb_000521_030 Hb_000521_030 Hb_057343_010--Hb_000521_030 Hb_000327_350 Hb_000327_350 Hb_057343_010--Hb_000327_350 Hb_003528_090 Hb_003528_090 Hb_057343_010--Hb_003528_090 Hb_000115_210 Hb_000115_210 Hb_172426_020--Hb_000115_210 Hb_005357_170 Hb_005357_170 Hb_172426_020--Hb_005357_170 Hb_150179_010 Hb_150179_010 Hb_172426_020--Hb_150179_010 Hb_004957_010 Hb_004957_010 Hb_172426_020--Hb_004957_010 Hb_000997_220 Hb_000997_220 Hb_172426_020--Hb_000997_220 Hb_029584_030 Hb_029584_030 Hb_172426_020--Hb_029584_030 Hb_000733_260 Hb_000733_260 Hb_000574_310--Hb_000733_260 Hb_000164_200 Hb_000164_200 Hb_000574_310--Hb_000164_200 Hb_001597_040 Hb_001597_040 Hb_000574_310--Hb_001597_040 Hb_001956_170 Hb_001956_170 Hb_000574_310--Hb_001956_170 Hb_007677_010 Hb_007677_010 Hb_000574_310--Hb_007677_010 Hb_003925_010 Hb_003925_010 Hb_000574_310--Hb_003925_010 Hb_000753_270 Hb_000753_270 Hb_000577_060--Hb_000753_270 Hb_000069_290 Hb_000069_290 Hb_000577_060--Hb_000069_290 Hb_004308_010 Hb_004308_010 Hb_000577_060--Hb_004308_010 Hb_000614_310 Hb_000614_310 Hb_000577_060--Hb_000614_310 Hb_000188_080 Hb_000188_080 Hb_000577_060--Hb_000188_080 Hb_054581_010 Hb_054581_010 Hb_000577_060--Hb_054581_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.169805 0 0.00852196
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.02212 0 0 0.00344767 0.0186469

CAGE analysis