Hb_003266_010

Information

Type -
Description -
Location Contig3266: 19140-19553
Sequence    

Annotation

kegg
ID rcu:RCOM_0558680
description hypothetical protein
nr
ID KDP21474.1
description hypothetical protein JCGZ_21945 [Jatropha curcas]
swissprot
ID A4ZDL6
description Antifungal protein ginkbilobin-2 OS=Ginkgo biloba GN=GNK2 PE=1 SV=1
trembl
ID A0A067JPK6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21945 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34342: 19146-19841
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003266_010 0.0 - - hypothetical protein JCGZ_21945 [Jatropha curcas]
2 Hb_000868_130 0.0753762143 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
3 Hb_002095_020 0.0823579343 - - PREDICTED: glutamate receptor 3.4-like isoform X1 [Jatropha curcas]
4 Hb_000473_100 0.0849338171 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
5 Hb_017358_020 0.0852221063 - - hypothetical protein POPTR_0014s16490g [Populus trichocarpa]
6 Hb_144449_010 0.0868989275 - - Potassium transporter, putative [Ricinus communis]
7 Hb_001046_030 0.0878631664 - - UDP-glucosyltransferase, putative [Ricinus communis]
8 Hb_011161_090 0.1016505968 - - -
9 Hb_002902_070 0.1043599244 - - PREDICTED: BTB/POZ domain-containing protein At5g67385 [Jatropha curcas]
10 Hb_000856_200 0.1081423512 - - ATPase 4, plasma membrane-type -like protein [Gossypium arboreum]
11 Hb_001417_060 0.1115175867 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
12 Hb_001369_390 0.1138925612 - - Glycerol-3-phosphate transporter, putative [Ricinus communis]
13 Hb_000836_030 0.1142182167 - - ubiquitin-conjugating enzyme h, putative [Ricinus communis]
14 Hb_000069_540 0.1153271916 - - PREDICTED: hydroquinone glucosyltransferase [Jatropha curcas]
15 Hb_004607_160 0.1165106276 - - PREDICTED: uncharacterized protein LOC105134931 [Populus euphratica]
16 Hb_000784_060 0.1181113017 - - conserved hypothetical protein [Ricinus communis]
17 Hb_143629_200 0.1186267242 - - hypothetical protein POPTR_0013s00300g [Populus trichocarpa]
18 Hb_000290_030 0.1199496899 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
19 Hb_010557_020 0.120021008 - - Mlo protein [Hevea brasiliensis]
20 Hb_000162_200 0.1241720471 - - PREDICTED: uncharacterized protein LOC105641759 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_003266_010 Hb_003266_010 Hb_000868_130 Hb_000868_130 Hb_003266_010--Hb_000868_130 Hb_002095_020 Hb_002095_020 Hb_003266_010--Hb_002095_020 Hb_000473_100 Hb_000473_100 Hb_003266_010--Hb_000473_100 Hb_017358_020 Hb_017358_020 Hb_003266_010--Hb_017358_020 Hb_144449_010 Hb_144449_010 Hb_003266_010--Hb_144449_010 Hb_001046_030 Hb_001046_030 Hb_003266_010--Hb_001046_030 Hb_000868_130--Hb_001046_030 Hb_002902_070 Hb_002902_070 Hb_000868_130--Hb_002902_070 Hb_000868_130--Hb_017358_020 Hb_000868_130--Hb_000473_100 Hb_000069_540 Hb_000069_540 Hb_000868_130--Hb_000069_540 Hb_001369_390 Hb_001369_390 Hb_002095_020--Hb_001369_390 Hb_002095_020--Hb_000868_130 Hb_004374_030 Hb_004374_030 Hb_002095_020--Hb_004374_030 Hb_004204_220 Hb_004204_220 Hb_002095_020--Hb_004204_220 Hb_000784_060 Hb_000784_060 Hb_002095_020--Hb_000784_060 Hb_000473_100--Hb_144449_010 Hb_002902_040 Hb_002902_040 Hb_000473_100--Hb_002902_040 Hb_000473_100--Hb_000069_540 Hb_001269_400 Hb_001269_400 Hb_000473_100--Hb_001269_400 Hb_000856_200 Hb_000856_200 Hb_000473_100--Hb_000856_200 Hb_017358_020--Hb_001046_030 Hb_001417_060 Hb_001417_060 Hb_017358_020--Hb_001417_060 Hb_032695_010 Hb_032695_010 Hb_017358_020--Hb_032695_010 Hb_000162_200 Hb_000162_200 Hb_017358_020--Hb_000162_200 Hb_010557_020 Hb_010557_020 Hb_144449_010--Hb_010557_020 Hb_004607_160 Hb_004607_160 Hb_144449_010--Hb_004607_160 Hb_152980_020 Hb_152980_020 Hb_144449_010--Hb_152980_020 Hb_144449_010--Hb_000856_200 Hb_001046_030--Hb_001417_060 Hb_001046_030--Hb_032695_010 Hb_001046_030--Hb_000856_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.87923 6.87052 12.8711 0 0.422051
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.80803 13.8155

CAGE analysis