Hb_003304_090

Information

Type -
Description -
Location Contig3304: 128666-129730
Sequence    

Annotation

kegg
ID rcu:RCOM_1591870
description hypothetical protein
nr
ID XP_012071703.1
description PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L2R1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04319 PE=4 SV=1
Gene Ontology
ID GO:0010033
description mrna for ar781 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003304_090 0.0 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
2 Hb_000011_320 0.0917500725 - - PREDICTED: uncharacterized protein LOC105631328 [Jatropha curcas]
3 Hb_003212_020 0.0922248014 - - hypothetical protein PHAVU_009G114800g [Phaseolus vulgaris]
4 Hb_004893_010 0.1005710125 - - PREDICTED: O-acyltransferase WSD1-like [Jatropha curcas]
5 Hb_001675_020 0.104443778 - - -
6 Hb_000705_050 0.1111280661 - - PREDICTED: uncharacterized protein C167.05 [Vitis vinifera]
7 Hb_000659_050 0.1163849239 - - PREDICTED: basic blue protein-like [Jatropha curcas]
8 Hb_008304_050 0.1207882484 - - PREDICTED: trans-cinnamate 4-monooxygenase [Jatropha curcas]
9 Hb_000389_100 0.1212023572 - - phenylalanine ammonia-lyase 1 [Manihot esculenta]
10 Hb_000561_040 0.1220217493 - - PREDICTED: dirigent protein 19-like [Jatropha curcas]
11 Hb_002869_090 0.1260800261 - - PREDICTED: dirigent protein 22-like [Jatropha curcas]
12 Hb_007403_100 0.1291174539 - - PREDICTED: probable purple acid phosphatase 20 [Jatropha curcas]
13 Hb_142056_010 0.131694459 - - PREDICTED: MATE efflux family protein 1 isoform X2 [Jatropha curcas]
14 Hb_032260_130 0.1358190474 - - hypothetical protein POPTR_0003s13800g [Populus trichocarpa]
15 Hb_000477_020 0.1371537093 - - hypothetical protein EUGRSUZ_C011052, partial [Eucalyptus grandis]
16 Hb_002007_330 0.1386586796 - - PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Jatropha curcas]
17 Hb_000069_150 0.1390629479 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
18 Hb_002000_100 0.1391118723 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Jatropha curcas]
19 Hb_000327_100 0.1397092301 - - hypothetical protein JCGZ_06658 [Jatropha curcas]
20 Hb_027400_020 0.1403553756 - - PREDICTED: uncharacterized protein At5g22580 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_003304_090 Hb_003304_090 Hb_000011_320 Hb_000011_320 Hb_003304_090--Hb_000011_320 Hb_003212_020 Hb_003212_020 Hb_003304_090--Hb_003212_020 Hb_004893_010 Hb_004893_010 Hb_003304_090--Hb_004893_010 Hb_001675_020 Hb_001675_020 Hb_003304_090--Hb_001675_020 Hb_000705_050 Hb_000705_050 Hb_003304_090--Hb_000705_050 Hb_000659_050 Hb_000659_050 Hb_003304_090--Hb_000659_050 Hb_000561_040 Hb_000561_040 Hb_000011_320--Hb_000561_040 Hb_008304_050 Hb_008304_050 Hb_000011_320--Hb_008304_050 Hb_000011_320--Hb_000705_050 Hb_000389_100 Hb_000389_100 Hb_000011_320--Hb_000389_100 Hb_000011_320--Hb_004893_010 Hb_003212_020--Hb_000705_050 Hb_003212_020--Hb_001675_020 Hb_003212_020--Hb_000011_320 Hb_001174_020 Hb_001174_020 Hb_003212_020--Hb_001174_020 Hb_000477_020 Hb_000477_020 Hb_003212_020--Hb_000477_020 Hb_004893_010--Hb_008304_050 Hb_003633_170 Hb_003633_170 Hb_004893_010--Hb_003633_170 Hb_032260_130 Hb_032260_130 Hb_004893_010--Hb_032260_130 Hb_031224_010 Hb_031224_010 Hb_004893_010--Hb_031224_010 Hb_164117_010 Hb_164117_010 Hb_004893_010--Hb_164117_010 Hb_000327_100 Hb_000327_100 Hb_001675_020--Hb_000327_100 Hb_001675_020--Hb_000659_050 Hb_001675_020--Hb_000477_020 Hb_007403_100 Hb_007403_100 Hb_001675_020--Hb_007403_100 Hb_002869_090 Hb_002869_090 Hb_001675_020--Hb_002869_090 Hb_007237_060 Hb_007237_060 Hb_001675_020--Hb_007237_060 Hb_034688_030 Hb_034688_030 Hb_000705_050--Hb_034688_030 Hb_000563_410 Hb_000563_410 Hb_000705_050--Hb_000563_410 Hb_000705_050--Hb_001174_020 Hb_000659_050--Hb_002869_090 Hb_000910_030 Hb_000910_030 Hb_000659_050--Hb_000910_030 Hb_000344_030 Hb_000344_030 Hb_000659_050--Hb_000344_030 Hb_000659_050--Hb_000327_100 Hb_002616_020 Hb_002616_020 Hb_000659_050--Hb_002616_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.348611 0.174705 2.53227 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.858808 0.606095

CAGE analysis