Hb_003355_010

Information

Type -
Description -
Location Contig3355: 74422-90910
Sequence    

Annotation

kegg
ID rcu:RCOM_0673570
description Heat shock 70 kDa protein, putative (EC:1.3.1.74)
nr
ID XP_002520598.1
description Heat shock 70 kDa protein, putative [Ricinus communis]
swissprot
ID F4JMJ1
description Heat shock 70 kDa protein 17 OS=Arabidopsis thaliana GN=HSP70-17 PE=2 SV=1
trembl
ID B9S3M9
description Heat shock 70 kDa protein, putative OS=Ricinus communis GN=RCOM_0673570 PE=3 SV=1
Gene Ontology
ID GO:0043231
description heat shock 70 kda protein 17

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35117: 74227-90927
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003355_010 0.0 - - Heat shock 70 kDa protein, putative [Ricinus communis]
2 Hb_106890_010 0.0394223226 - - PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic isoform X2 [Jatropha curcas]
3 Hb_030736_040 0.0662630698 - - PREDICTED: uncharacterized protein LOC105638926 isoform X1 [Jatropha curcas]
4 Hb_005571_010 0.0686479479 - - PREDICTED: 15-cis-phytoene desaturase, chloroplastic/chromoplastic [Jatropha curcas]
5 Hb_000496_130 0.0747614421 - - PREDICTED: fructokinase-1 [Jatropha curcas]
6 Hb_007741_120 0.078452257 - - PREDICTED: phosphatidate cytidylyltransferase 4, chloroplastic [Jatropha curcas]
7 Hb_003490_060 0.0803870178 - - PREDICTED: probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X2 [Sesamum indicum]
8 Hb_055690_010 0.0805720308 - - PREDICTED: pheophytinase, chloroplastic [Jatropha curcas]
9 Hb_000585_110 0.080979455 - - PREDICTED: probable protein phosphatase 2C 66 [Jatropha curcas]
10 Hb_000243_120 0.0843727729 - - PREDICTED: MORC family CW-type zinc finger protein 3-like isoform X2 [Jatropha curcas]
11 Hb_019654_020 0.0844365264 - - PREDICTED: T-complex protein 1 subunit beta [Jatropha curcas]
12 Hb_002249_080 0.0851710178 - - lysosomal alpha-mannosidase, putative [Ricinus communis]
13 Hb_003440_020 0.0864379781 - - PREDICTED: serine protease SPPA, chloroplastic isoform X2 [Jatropha curcas]
14 Hb_138585_030 0.0865576062 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]
15 Hb_004111_030 0.0884629278 - - PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like [Jatropha curcas]
16 Hb_001117_110 0.0887026945 - - PREDICTED: dynamin-2A [Jatropha curcas]
17 Hb_008705_020 0.0895545774 - - PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468 homolog isoform X1 [Jatropha curcas]
18 Hb_000116_250 0.0897888547 - - PREDICTED: DNA mismatch repair protein MLH3 [Jatropha curcas]
19 Hb_002828_060 0.0900256922 - - PREDICTED: probable phytol kinase 3, chloroplastic [Jatropha curcas]
20 Hb_005694_060 0.0914491042 - - PREDICTED: bifunctional fucokinase/fucose pyrophosphorylase [Jatropha curcas]

Gene co-expression network

sample Hb_003355_010 Hb_003355_010 Hb_106890_010 Hb_106890_010 Hb_003355_010--Hb_106890_010 Hb_030736_040 Hb_030736_040 Hb_003355_010--Hb_030736_040 Hb_005571_010 Hb_005571_010 Hb_003355_010--Hb_005571_010 Hb_000496_130 Hb_000496_130 Hb_003355_010--Hb_000496_130 Hb_007741_120 Hb_007741_120 Hb_003355_010--Hb_007741_120 Hb_003490_060 Hb_003490_060 Hb_003355_010--Hb_003490_060 Hb_106890_010--Hb_030736_040 Hb_106890_010--Hb_003490_060 Hb_106890_010--Hb_005571_010 Hb_106890_010--Hb_007741_120 Hb_019654_020 Hb_019654_020 Hb_106890_010--Hb_019654_020 Hb_001117_110 Hb_001117_110 Hb_030736_040--Hb_001117_110 Hb_055690_010 Hb_055690_010 Hb_030736_040--Hb_055690_010 Hb_068804_090 Hb_068804_090 Hb_030736_040--Hb_068804_090 Hb_008705_020 Hb_008705_020 Hb_030736_040--Hb_008705_020 Hb_023988_030 Hb_023988_030 Hb_005571_010--Hb_023988_030 Hb_002150_020 Hb_002150_020 Hb_005571_010--Hb_002150_020 Hb_005914_040 Hb_005914_040 Hb_005571_010--Hb_005914_040 Hb_005571_010--Hb_055690_010 Hb_001143_100 Hb_001143_100 Hb_000496_130--Hb_001143_100 Hb_007943_150 Hb_007943_150 Hb_000496_130--Hb_007943_150 Hb_025194_090 Hb_025194_090 Hb_000496_130--Hb_025194_090 Hb_004710_020 Hb_004710_020 Hb_000496_130--Hb_004710_020 Hb_000510_190 Hb_000510_190 Hb_000496_130--Hb_000510_190 Hb_006573_150 Hb_006573_150 Hb_007741_120--Hb_006573_150 Hb_007933_040 Hb_007933_040 Hb_007741_120--Hb_007933_040 Hb_003159_050 Hb_003159_050 Hb_007741_120--Hb_003159_050 Hb_001242_120 Hb_001242_120 Hb_007741_120--Hb_001242_120 Hb_002828_060 Hb_002828_060 Hb_003490_060--Hb_002828_060 Hb_000976_110 Hb_000976_110 Hb_003490_060--Hb_000976_110 Hb_002392_020 Hb_002392_020 Hb_003490_060--Hb_002392_020 Hb_000109_260 Hb_000109_260 Hb_003490_060--Hb_000109_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.8637 10.5885 28.5677 22.1389 9.22218 8.36604
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.94599 9.65486 9.28492 22.3002 39.8694

CAGE analysis