Hb_003387_080

Information

Type -
Description -
Location Contig3387: 82161-83507
Sequence    

Annotation

kegg
ID rcu:RCOM_0220600
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative
nr
ID XP_002524443.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID Q94C25
description Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1
trembl
ID B9SEM4
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative OS=Ricinus communis GN=RCOM_0220600 PE=3 SV=1
Gene Ontology
ID GO:0004674
description probable receptor-like protein kinase at5g20050

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35409: 83449-83651
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003387_080 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_000318_050 0.0863230648 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40 isoform X1 [Jatropha curcas]
3 Hb_005016_080 0.0967791218 - - PREDICTED: neurofilament heavy polypeptide-like [Jatropha curcas]
4 Hb_002849_120 0.0967846898 - - ferric reductase oxidase [Manihot esculenta]
5 Hb_005463_070 0.097370382 - - calcium ion binding protein, putative [Ricinus communis]
6 Hb_001160_020 0.0982327548 transcription factor TF Family: NF-YA Nuclear transcription factor Y subunit A-3, putative [Ricinus communis]
7 Hb_006269_010 0.1008009142 - - hypothetical protein JCGZ_21552 [Jatropha curcas]
8 Hb_000237_070 0.1070677693 - - Purple acid phosphatase precursor, putative [Ricinus communis]
9 Hb_003029_010 0.1072463683 transcription factor TF Family: WRKY conserved hypothetical protein [Ricinus communis]
10 Hb_003849_030 0.1090396518 - - hypothetical protein AALP_AA5G029900 [Arabis alpina]
11 Hb_002010_100 0.1115388185 - - PREDICTED: uncharacterized protein LOC105633355 [Jatropha curcas]
12 Hb_005867_030 0.1161453859 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
13 Hb_006483_090 0.1170157724 - - PREDICTED: uncharacterized protein LOC105639979 [Jatropha curcas]
14 Hb_002783_140 0.1172908132 - - PREDICTED: uncharacterized protein LOC105635332 [Jatropha curcas]
15 Hb_000260_480 0.1194211878 transcription factor TF Family: GRAS PREDICTED: protein SCARECROW [Jatropha curcas]
16 Hb_001153_090 0.1205757057 - - PREDICTED: protein FAM63A [Jatropha curcas]
17 Hb_002890_320 0.1210588435 - - PREDICTED: uncharacterized protein LOC105631579 [Jatropha curcas]
18 Hb_033153_040 0.1214786037 - - o-methyltransferase, putative [Ricinus communis]
19 Hb_007483_080 0.1219209948 - - hypothetical protein RCOM_0634810 [Ricinus communis]
20 Hb_005569_030 0.1232407278 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_003387_080 Hb_003387_080 Hb_000318_050 Hb_000318_050 Hb_003387_080--Hb_000318_050 Hb_005016_080 Hb_005016_080 Hb_003387_080--Hb_005016_080 Hb_002849_120 Hb_002849_120 Hb_003387_080--Hb_002849_120 Hb_005463_070 Hb_005463_070 Hb_003387_080--Hb_005463_070 Hb_001160_020 Hb_001160_020 Hb_003387_080--Hb_001160_020 Hb_006269_010 Hb_006269_010 Hb_003387_080--Hb_006269_010 Hb_000318_050--Hb_005463_070 Hb_000382_030 Hb_000382_030 Hb_000318_050--Hb_000382_030 Hb_000318_050--Hb_001160_020 Hb_000318_050--Hb_005016_080 Hb_002010_100 Hb_002010_100 Hb_000318_050--Hb_002010_100 Hb_005016_080--Hb_002010_100 Hb_002361_010 Hb_002361_010 Hb_005016_080--Hb_002361_010 Hb_005016_080--Hb_005463_070 Hb_005016_080--Hb_001160_020 Hb_033153_040 Hb_033153_040 Hb_002849_120--Hb_033153_040 Hb_001153_090 Hb_001153_090 Hb_002849_120--Hb_001153_090 Hb_003849_030 Hb_003849_030 Hb_002849_120--Hb_003849_030 Hb_000680_020 Hb_000680_020 Hb_002849_120--Hb_000680_020 Hb_002849_120--Hb_001160_020 Hb_127661_010 Hb_127661_010 Hb_002849_120--Hb_127661_010 Hb_005463_070--Hb_002010_100 Hb_005867_030 Hb_005867_030 Hb_005463_070--Hb_005867_030 Hb_005463_070--Hb_002361_010 Hb_007747_100 Hb_007747_100 Hb_001160_020--Hb_007747_100 Hb_001160_020--Hb_003849_030 Hb_001160_020--Hb_001153_090 Hb_023344_130 Hb_023344_130 Hb_001160_020--Hb_023344_130 Hb_006269_010--Hb_001153_090 Hb_001174_030 Hb_001174_030 Hb_006269_010--Hb_001174_030 Hb_000477_110 Hb_000477_110 Hb_006269_010--Hb_000477_110 Hb_000085_220 Hb_000085_220 Hb_006269_010--Hb_000085_220 Hb_014361_020 Hb_014361_020 Hb_006269_010--Hb_014361_020 Hb_004166_020 Hb_004166_020 Hb_006269_010--Hb_004166_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.87658 3.43297 1.55973 0 0.0158617
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.61365 2.2602

CAGE analysis