Hb_003401_050

Information

Type -
Description -
Location Contig3401: 27175-28907
Sequence    

Annotation

kegg
ID rcu:RCOM_1248790
description plant origin recognition complex subunit, putative
nr
ID XP_012074904.1
description PREDICTED: origin of replication complex subunit 2 [Jatropha curcas]
swissprot
ID Q38899
description Origin of replication complex subunit 2 OS=Arabidopsis thaliana GN=ORC2 PE=1 SV=1
trembl
ID A0A067KTL3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09048 PE=4 SV=1
Gene Ontology
ID GO:0043229
description origin recognition complex subunit 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003401_050 0.0 - - PREDICTED: origin of replication complex subunit 2 [Jatropha curcas]
2 Hb_005883_060 0.0871757107 - - PREDICTED: polynucleotide 5'-hydroxyl-kinase NOL9 isoform X1 [Jatropha curcas]
3 Hb_000161_070 0.1043325132 - - PREDICTED: ATP phosphoribosyltransferase 2, chloroplastic-like [Jatropha curcas]
4 Hb_000635_250 0.1050423243 - - PREDICTED: uncharacterized protein LOC105635484 [Jatropha curcas]
5 Hb_002044_080 0.1225046812 - - PREDICTED: secretion-regulating guanine nucleotide exchange factor isoform X2 [Jatropha curcas]
6 Hb_005895_030 0.1246718373 - - PREDICTED: uncharacterized protein LOC105643388 [Jatropha curcas]
7 Hb_000608_250 0.1297257044 - - Cytidine/deoxycytidylate deaminase family protein isoform 2 [Theobroma cacao]
8 Hb_000808_230 0.1314494951 - - PREDICTED: peptide chain release factor PrfB2, chloroplastic [Jatropha curcas]
9 Hb_001439_190 0.1317749568 - - PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Jatropha curcas]
10 Hb_004143_060 0.132587266 - - DNA binding protein, putative [Ricinus communis]
11 Hb_001258_040 0.1330683054 - - hypothetical protein JCGZ_12578 [Jatropha curcas]
12 Hb_002205_070 0.134573149 - - PREDICTED: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X1 [Jatropha curcas]
13 Hb_022693_060 0.1348635658 - - -
14 Hb_017904_010 0.135394641 - - PREDICTED: DNA repair protein recA homolog 2, mitochondrial [Jatropha curcas]
15 Hb_008165_060 0.1354373242 - - PREDICTED: uncharacterized protein LOC105635541 [Jatropha curcas]
16 Hb_000976_170 0.1360358504 - - PREDICTED: ATPase family AAA domain-containing protein 3-like [Jatropha curcas]
17 Hb_000329_320 0.1370268593 - - PREDICTED: DNA ligase 1 [Jatropha curcas]
18 Hb_025240_040 0.1377024678 - - hypothetical protein JCGZ_02438 [Jatropha curcas]
19 Hb_000861_020 0.1379468173 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105631286 [Jatropha curcas]
20 Hb_000000_250 0.1379842494 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g19290 [Jatropha curcas]

Gene co-expression network

sample Hb_003401_050 Hb_003401_050 Hb_005883_060 Hb_005883_060 Hb_003401_050--Hb_005883_060 Hb_000161_070 Hb_000161_070 Hb_003401_050--Hb_000161_070 Hb_000635_250 Hb_000635_250 Hb_003401_050--Hb_000635_250 Hb_002044_080 Hb_002044_080 Hb_003401_050--Hb_002044_080 Hb_005895_030 Hb_005895_030 Hb_003401_050--Hb_005895_030 Hb_000608_250 Hb_000608_250 Hb_003401_050--Hb_000608_250 Hb_001512_030 Hb_001512_030 Hb_005883_060--Hb_001512_030 Hb_000120_460 Hb_000120_460 Hb_005883_060--Hb_000120_460 Hb_025240_040 Hb_025240_040 Hb_005883_060--Hb_025240_040 Hb_000985_030 Hb_000985_030 Hb_005883_060--Hb_000985_030 Hb_058999_020 Hb_058999_020 Hb_005883_060--Hb_058999_020 Hb_002182_080 Hb_002182_080 Hb_005883_060--Hb_002182_080 Hb_000161_070--Hb_000635_250 Hb_110291_010 Hb_110291_010 Hb_000161_070--Hb_110291_010 Hb_000959_260 Hb_000959_260 Hb_000161_070--Hb_000959_260 Hb_000120_730 Hb_000120_730 Hb_000161_070--Hb_000120_730 Hb_000161_070--Hb_005883_060 Hb_001258_040 Hb_001258_040 Hb_000635_250--Hb_001258_040 Hb_001545_120 Hb_001545_120 Hb_000635_250--Hb_001545_120 Hb_000635_250--Hb_002044_080 Hb_044728_010 Hb_044728_010 Hb_000635_250--Hb_044728_010 Hb_002725_120 Hb_002725_120 Hb_000635_250--Hb_002725_120 Hb_009767_110 Hb_009767_110 Hb_000635_250--Hb_009767_110 Hb_000056_200 Hb_000056_200 Hb_002044_080--Hb_000056_200 Hb_002044_080--Hb_058999_020 Hb_006502_090 Hb_006502_090 Hb_002044_080--Hb_006502_090 Hb_001242_060 Hb_001242_060 Hb_002044_080--Hb_001242_060 Hb_000120_790 Hb_000120_790 Hb_002044_080--Hb_000120_790 Hb_000085_050 Hb_000085_050 Hb_002044_080--Hb_000085_050 Hb_002687_130 Hb_002687_130 Hb_005895_030--Hb_002687_130 Hb_005895_030--Hb_000608_250 Hb_000170_210 Hb_000170_210 Hb_005895_030--Hb_000170_210 Hb_163950_030 Hb_163950_030 Hb_005895_030--Hb_163950_030 Hb_000690_130 Hb_000690_130 Hb_005895_030--Hb_000690_130 Hb_001675_180 Hb_001675_180 Hb_000608_250--Hb_001675_180 Hb_004841_010 Hb_004841_010 Hb_000608_250--Hb_004841_010 Hb_011139_030 Hb_011139_030 Hb_000608_250--Hb_011139_030 Hb_000342_130 Hb_000342_130 Hb_000608_250--Hb_000342_130 Hb_000428_050 Hb_000428_050 Hb_000608_250--Hb_000428_050 Hb_000608_250--Hb_000170_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.67425 2.65653 4.77146 2.20085 2.87213 11.4435
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.08687 8.83424 8.99204 4.07226 5.81652

CAGE analysis