Hb_003407_050

Information

Type -
Description -
Location Contig3407: 42955-44836
Sequence    

Annotation

kegg
ID rcu:RCOM_0526250
description UDP-glucuronosyltransferase, putative (EC:2.4.1.115)
nr
ID XP_002526117.1
description UDP-glucuronosyltransferase, putative [Ricinus communis]
swissprot
ID Q9SGA8
description UDP-glycosyltransferase 83A1 OS=Arabidopsis thaliana GN=UGT83A1 PE=2 SV=1
trembl
ID B9SJE8
description UDP-glucuronosyltransferase, putative OS=Ricinus communis GN=RCOM_0526250 PE=4 SV=1
Gene Ontology
ID GO:0047213
description udp-glycosyltransferase 83a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003407_050 0.0 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
2 Hb_005018_050 0.019896328 - - PREDICTED: licodione synthase-like [Jatropha curcas]
3 Hb_003120_090 0.0270284455 - - PREDICTED: uncharacterized protein LOC100264374 [Vitis vinifera]
4 Hb_031194_030 0.0430053187 - - ribulose 1,5-bisphosphate carboxylase/oxygenase [Stackhousia minima]
5 Hb_002704_090 0.0513686974 - - cytochrome P450, putative [Ricinus communis]
6 Hb_088080_010 0.0590459051 - - photosystem I P700 chlorophyll a apoprotein A1 [Matelea biflora]
7 Hb_007595_030 0.0592718341 - - psbA gene product (chloroplast) [Silene noctiflora]
8 Hb_007933_010 0.0601740055 - - ATP-binding cassette transporter, putative [Ricinus communis]
9 Hb_126973_010 0.0618949549 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Vitis vinifera]
10 Hb_000938_050 0.0634074685 - - hypothetical protein JCGZ_09640 [Jatropha curcas]
11 Hb_000853_280 0.0643633327 - - PREDICTED: extensin-like [Jatropha curcas]
12 Hb_007645_040 0.067395331 - - ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Tachigali myrmecophila]
13 Hb_002093_010 0.0676659877 - - PREDICTED: non-symbiotic hemoglobin 2 [Jatropha curcas]
14 Hb_002835_420 0.0701131804 - - photosystem I P700 chlorophyll A apoprotein A2 [Medicago truncatula]
15 Hb_106850_010 0.0725915948 - - photosystem II protein D2 [Lactuca sativa]
16 Hb_154980_010 0.0748611728 - - photosystem I P700 chlorophyll A apoprotein A2 [Medicago truncatula]
17 Hb_007645_050 0.0750698997 - - acetyl-CoA carboxylase beta subunit [Hevea brasiliensis]
18 Hb_034168_060 0.0791873635 - - ribulose-1-5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Cucumis argenteus]
19 Hb_000627_060 0.0803808092 - - -
20 Hb_003963_030 0.0823473128 - - psbB [Jatropha curcas]

Gene co-expression network

sample Hb_003407_050 Hb_003407_050 Hb_005018_050 Hb_005018_050 Hb_003407_050--Hb_005018_050 Hb_003120_090 Hb_003120_090 Hb_003407_050--Hb_003120_090 Hb_031194_030 Hb_031194_030 Hb_003407_050--Hb_031194_030 Hb_002704_090 Hb_002704_090 Hb_003407_050--Hb_002704_090 Hb_088080_010 Hb_088080_010 Hb_003407_050--Hb_088080_010 Hb_007595_030 Hb_007595_030 Hb_003407_050--Hb_007595_030 Hb_005018_050--Hb_003120_090 Hb_005018_050--Hb_031194_030 Hb_005018_050--Hb_002704_090 Hb_007933_010 Hb_007933_010 Hb_005018_050--Hb_007933_010 Hb_005018_050--Hb_088080_010 Hb_003120_090--Hb_002704_090 Hb_003120_090--Hb_007933_010 Hb_003120_090--Hb_031194_030 Hb_000853_280 Hb_000853_280 Hb_003120_090--Hb_000853_280 Hb_031194_030--Hb_088080_010 Hb_031194_030--Hb_007595_030 Hb_031194_030--Hb_002704_090 Hb_002093_010 Hb_002093_010 Hb_002704_090--Hb_002093_010 Hb_000627_060 Hb_000627_060 Hb_002704_090--Hb_000627_060 Hb_002704_090--Hb_007933_010 Hb_088080_010--Hb_007595_030 Hb_007645_050 Hb_007645_050 Hb_088080_010--Hb_007645_050 Hb_003963_030 Hb_003963_030 Hb_088080_010--Hb_003963_030 Hb_088080_010--Hb_003120_090 Hb_007595_030--Hb_007645_050 Hb_007595_030--Hb_003963_030 Hb_007595_030--Hb_005018_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0207863 0.0102793 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.523275

CAGE analysis