Hb_003430_020

Information

Type -
Description -
Location Contig3430: 8372-15809
Sequence    

Annotation

kegg
ID pmum:103321739
description aldehyde dehydrogenase family 2 member B7, mitochondrial
nr
ID XP_012085348.1
description PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Jatropha curcas]
swissprot
ID Q9SU63
description Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=2 SV=1
trembl
ID A0A067K2T2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17723 PE=3 SV=1
Gene Ontology
ID GO:0004029
description aldehyde dehydrogenase family 2 member mitochondrial-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35862: 8583-15481
cDNA
(Sanger)
(ID:Location)		 025_A13.ab1: 13354-15481

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003430_020 0.0 - - PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Jatropha curcas]
2 Hb_009581_040 0.0839609381 - - hypothetical protein B456_011G052100 [Gossypium raimondii]
3 Hb_134017_010 0.0857854915 - - kinase, putative [Ricinus communis]
4 Hb_009581_050 0.0867926127 - - hypothetical protein CISIN_1g0025812mg, partial [Citrus sinensis]
5 Hb_003439_090 0.0871450777 - - kinase, putative [Ricinus communis]
6 Hb_005183_200 0.0919588448 - - EG964 [Manihot glaziovii]
7 Hb_012807_060 0.0924253107 - - ABC transporter family protein [Hevea brasiliensis]
8 Hb_003439_020 0.0936165809 - - PREDICTED: L-type lectin-domain containing receptor kinase IV.1-like [Solanum lycopersicum]
9 Hb_001862_060 0.0968078947 - - PREDICTED: uncharacterized protein LOC105639802 isoform X1 [Jatropha curcas]
10 Hb_008406_020 0.1011724257 - - PREDICTED: probable aminotransferase TAT2 [Jatropha curcas]
11 Hb_000407_080 0.1040410911 - - 1-aminocyclopropane-1-carboxylate oxidase [Hevea brasiliensis]
12 Hb_013914_020 0.1052506668 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
13 Hb_000045_180 0.1059885099 - - aquaporin PIP1 [Hevea brasiliensis]
14 Hb_000255_020 0.1097451705 - - PREDICTED: cysteine-rich receptor-like protein kinase 10 [Jatropha curcas]
15 Hb_074312_020 0.1118852384 - - cytochrome P450, putative [Ricinus communis]
16 Hb_003376_200 0.1122712169 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
17 Hb_008226_120 0.1125379617 - - ATP binding protein, putative [Ricinus communis]
18 Hb_000589_180 0.1138327162 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 9 [Jatropha curcas]
19 Hb_000586_100 0.1138929294 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002007_140 0.1148547929 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein NUTCRACKER-like [Populus euphratica]

Gene co-expression network

sample Hb_003430_020 Hb_003430_020 Hb_009581_040 Hb_009581_040 Hb_003430_020--Hb_009581_040 Hb_134017_010 Hb_134017_010 Hb_003430_020--Hb_134017_010 Hb_009581_050 Hb_009581_050 Hb_003430_020--Hb_009581_050 Hb_003439_090 Hb_003439_090 Hb_003430_020--Hb_003439_090 Hb_005183_200 Hb_005183_200 Hb_003430_020--Hb_005183_200 Hb_012807_060 Hb_012807_060 Hb_003430_020--Hb_012807_060 Hb_008406_020 Hb_008406_020 Hb_009581_040--Hb_008406_020 Hb_074312_020 Hb_074312_020 Hb_009581_040--Hb_074312_020 Hb_001862_060 Hb_001862_060 Hb_009581_040--Hb_001862_060 Hb_000255_020 Hb_000255_020 Hb_009581_040--Hb_000255_020 Hb_002276_100 Hb_002276_100 Hb_009581_040--Hb_002276_100 Hb_003439_020 Hb_003439_020 Hb_134017_010--Hb_003439_020 Hb_003376_200 Hb_003376_200 Hb_134017_010--Hb_003376_200 Hb_134017_010--Hb_003439_090 Hb_134017_010--Hb_074312_020 Hb_130967_010 Hb_130967_010 Hb_134017_010--Hb_130967_010 Hb_000407_080 Hb_000407_080 Hb_009581_050--Hb_000407_080 Hb_009581_050--Hb_012807_060 Hb_002007_140 Hb_002007_140 Hb_009581_050--Hb_002007_140 Hb_003807_020 Hb_003807_020 Hb_009581_050--Hb_003807_020 Hb_000335_050 Hb_000335_050 Hb_009581_050--Hb_000335_050 Hb_000586_100 Hb_000586_100 Hb_003439_090--Hb_000586_100 Hb_013914_020 Hb_013914_020 Hb_003439_090--Hb_013914_020 Hb_000045_180 Hb_000045_180 Hb_003439_090--Hb_000045_180 Hb_003439_090--Hb_000407_080 Hb_001515_050 Hb_001515_050 Hb_005183_200--Hb_001515_050 Hb_005183_200--Hb_003439_020 Hb_005183_200--Hb_009581_040 Hb_052764_080 Hb_052764_080 Hb_005183_200--Hb_052764_080 Hb_005183_200--Hb_074312_020 Hb_003052_120 Hb_003052_120 Hb_012807_060--Hb_003052_120 Hb_002551_090 Hb_002551_090 Hb_012807_060--Hb_002551_090 Hb_000579_180 Hb_000579_180 Hb_012807_060--Hb_000579_180 Hb_008226_120 Hb_008226_120 Hb_012807_060--Hb_008226_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.572585 106.937 10.8869 52.8367 0.539998 0.554776
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.9672 0.267048 0.203791 91.3869 16.0775

CAGE analysis