Hb_003464_080

Information

Type -
Description -
Location Contig3464: 61297-69254
Sequence    

Annotation

kegg
ID pop:POPTR_0006s11860g
description pyruvate kinase family protein
nr
ID XP_012082542.1
description PREDICTED: pyruvate kinase, cytosolic isozyme-like [Jatropha curcas]
swissprot
ID Q42806
description Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1
trembl
ID A0A067KBS5
description Pyruvate kinase OS=Jatropha curcas GN=JCGZ_16628 PE=3 SV=1
Gene Ontology
ID GO:0000287
description pyruvate cytosolic isozyme-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36133: 61412-68998
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003464_080 0.0 - - PREDICTED: pyruvate kinase, cytosolic isozyme-like [Jatropha curcas]
2 Hb_002217_030 0.0562019344 - - PREDICTED: DNA (cytosine-5)-methyltransferase DRM2 isoform X1 [Jatropha curcas]
3 Hb_000089_120 0.0722644071 - - WD-repeat protein, putative [Ricinus communis]
4 Hb_000200_120 0.0731876017 - - PREDICTED: probable fructose-bisphosphate aldolase 3, chloroplastic [Jatropha curcas]
5 Hb_143629_110 0.0772440546 - - glutamyl-tRNA synthetase, cytoplasmic, putative [Ricinus communis]
6 Hb_116349_070 0.0810139604 - - hypothetical protein JCGZ_21753 [Jatropha curcas]
7 Hb_001635_090 0.0819567024 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 7 isoform X1 [Populus euphratica]
8 Hb_000345_240 0.0820760001 - - PREDICTED: cyclin-H1-1 [Jatropha curcas]
9 Hb_000261_240 0.0832287399 - - RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha [Manihot esculenta]
10 Hb_028872_090 0.0841089998 - - PREDICTED: urease [Jatropha curcas]
11 Hb_006355_090 0.0843571595 desease resistance Gene Name: AAA PREDICTED: 26S proteasome regulatory subunit 4 homolog A [Jatropha curcas]
12 Hb_034552_030 0.085900331 - - PREDICTED: pleckstrin homology domain-containing protein 1 [Jatropha curcas]
13 Hb_000260_330 0.0862236157 - - PREDICTED: uncharacterized protein LOC103438625 [Malus domestica]
14 Hb_000182_040 0.0864278181 transcription factor TF Family: SNF2 PREDICTED: protein CHROMATIN REMODELING 24 [Jatropha curcas]
15 Hb_002681_090 0.0876742105 - - PREDICTED: golgin candidate 6 isoform X1 [Jatropha curcas]
16 Hb_000369_130 0.089129182 - - PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Jatropha curcas]
17 Hb_001178_070 0.0895070974 - - PREDICTED: BTB/POZ domain-containing protein FBL11 [Jatropha curcas]
18 Hb_001860_030 0.0896214444 - - PREDICTED: cleavage stimulation factor subunit 77 isoform X5 [Jatropha curcas]
19 Hb_000390_320 0.0899423066 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor A-1b-like [Jatropha curcas]
20 Hb_164544_010 0.090389374 - - PREDICTED: protein arginine N-methyltransferase 1.5 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_003464_080 Hb_003464_080 Hb_002217_030 Hb_002217_030 Hb_003464_080--Hb_002217_030 Hb_000089_120 Hb_000089_120 Hb_003464_080--Hb_000089_120 Hb_000200_120 Hb_000200_120 Hb_003464_080--Hb_000200_120 Hb_143629_110 Hb_143629_110 Hb_003464_080--Hb_143629_110 Hb_116349_070 Hb_116349_070 Hb_003464_080--Hb_116349_070 Hb_001635_090 Hb_001635_090 Hb_003464_080--Hb_001635_090 Hb_002217_030--Hb_000200_120 Hb_000182_040 Hb_000182_040 Hb_002217_030--Hb_000182_040 Hb_001232_010 Hb_001232_010 Hb_002217_030--Hb_001232_010 Hb_001860_030 Hb_001860_030 Hb_002217_030--Hb_001860_030 Hb_001235_140 Hb_001235_140 Hb_002217_030--Hb_001235_140 Hb_000089_120--Hb_116349_070 Hb_000261_240 Hb_000261_240 Hb_000089_120--Hb_000261_240 Hb_007657_020 Hb_007657_020 Hb_000089_120--Hb_007657_020 Hb_005588_090 Hb_005588_090 Hb_000089_120--Hb_005588_090 Hb_002784_020 Hb_002784_020 Hb_000089_120--Hb_002784_020 Hb_000398_080 Hb_000398_080 Hb_000089_120--Hb_000398_080 Hb_001178_070 Hb_001178_070 Hb_000200_120--Hb_001178_070 Hb_000116_410 Hb_000116_410 Hb_000200_120--Hb_000116_410 Hb_000200_120--Hb_001860_030 Hb_000200_120--Hb_143629_110 Hb_032202_200 Hb_032202_200 Hb_143629_110--Hb_032202_200 Hb_123903_010 Hb_123903_010 Hb_143629_110--Hb_123903_010 Hb_000390_320 Hb_000390_320 Hb_143629_110--Hb_000390_320 Hb_001617_060 Hb_001617_060 Hb_143629_110--Hb_001617_060 Hb_025477_040 Hb_025477_040 Hb_143629_110--Hb_025477_040 Hb_000617_180 Hb_000617_180 Hb_143629_110--Hb_000617_180 Hb_116349_070--Hb_005588_090 Hb_004267_040 Hb_004267_040 Hb_116349_070--Hb_004267_040 Hb_000120_280 Hb_000120_280 Hb_116349_070--Hb_000120_280 Hb_000617_100 Hb_000617_100 Hb_116349_070--Hb_000617_100 Hb_000120_430 Hb_000120_430 Hb_116349_070--Hb_000120_430 Hb_001408_040 Hb_001408_040 Hb_001635_090--Hb_001408_040 Hb_001635_090--Hb_000116_410 Hb_001584_120 Hb_001584_120 Hb_001635_090--Hb_001584_120 Hb_007576_110 Hb_007576_110 Hb_001635_090--Hb_007576_110 Hb_000173_490 Hb_000173_490 Hb_001635_090--Hb_000173_490 Hb_000120_670 Hb_000120_670 Hb_001635_090--Hb_000120_670
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
25.7773 26.3752 22.1235 33.8665 34.2393 37.3016
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.5915 24.6734 20.0931 47.4953 14.0164

CAGE analysis