Hb_003492_030

Information

Type -
Description -
Location Contig3492: 53292-60185
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003492_030 0.0 - - -
2 Hb_000163_120 0.0306840295 - - -
3 Hb_003866_010 0.0532695446 - - Polyprotein, putative [Solanum demissum]
4 Hb_000445_340 0.0620555366 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000465_200 0.0657725021 - - PREDICTED: protein NSP-INTERACTING KINASE 1 [Jatropha curcas]
6 Hb_000053_090 0.065905305 - - PREDICTED: clavaminate synthase-like protein At3g21360 [Populus euphratica]
7 Hb_072639_010 0.0660778281 - - JHL22C18.10 [Jatropha curcas]
8 Hb_008014_080 0.0671759065 - - PREDICTED: uncharacterized protein LOC103848614 [Brassica rapa]
9 Hb_000212_340 0.0682699278 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000200_260 0.0721563265 - - PREDICTED: uncharacterized protein LOC104232531 isoform X2 [Nicotiana sylvestris]
11 Hb_002001_040 0.0722733724 - - hypothetical protein CISIN_1g044945mg, partial [Citrus sinensis]
12 Hb_000207_410 0.0740179863 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000537_110 0.074779725 - - -
14 Hb_001184_120 0.2150945916 - - hypothetical protein CICLE_v10025281mg [Citrus clementina]
15 Hb_001433_060 0.2178588229 - - hypothetical protein JCGZ_23291 [Jatropha curcas]
16 Hb_000680_040 0.301480196 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
17 Hb_034589_010 0.3359666046 - - hypothetical protein MIMGU_mgv1a020753mg, partial [Erythranthe guttata]
18 Hb_002485_020 0.3414650174 - - metal transport family protein [Populus trichocarpa]
19 Hb_003811_010 0.3440682597 - - PREDICTED: uncharacterized protein LOC102611294 [Citrus sinensis]
20 Hb_040948_020 0.3453002292 - - -

Gene co-expression network

sample Hb_003492_030 Hb_003492_030 Hb_000163_120 Hb_000163_120 Hb_003492_030--Hb_000163_120 Hb_003866_010 Hb_003866_010 Hb_003492_030--Hb_003866_010 Hb_000445_340 Hb_000445_340 Hb_003492_030--Hb_000445_340 Hb_000465_200 Hb_000465_200 Hb_003492_030--Hb_000465_200 Hb_000053_090 Hb_000053_090 Hb_003492_030--Hb_000053_090 Hb_072639_010 Hb_072639_010 Hb_003492_030--Hb_072639_010 Hb_000163_120--Hb_000465_200 Hb_002001_040 Hb_002001_040 Hb_000163_120--Hb_002001_040 Hb_000207_410 Hb_000207_410 Hb_000163_120--Hb_000207_410 Hb_000537_110 Hb_000537_110 Hb_000163_120--Hb_000537_110 Hb_000163_120--Hb_003866_010 Hb_003866_010--Hb_000445_340 Hb_003866_010--Hb_000053_090 Hb_003866_010--Hb_072639_010 Hb_008014_080 Hb_008014_080 Hb_003866_010--Hb_008014_080 Hb_000212_340 Hb_000212_340 Hb_003866_010--Hb_000212_340 Hb_000200_260 Hb_000200_260 Hb_003866_010--Hb_000200_260 Hb_000445_340--Hb_000053_090 Hb_000445_340--Hb_072639_010 Hb_000445_340--Hb_008014_080 Hb_000445_340--Hb_000212_340 Hb_000445_340--Hb_000200_260 Hb_000465_200--Hb_002001_040 Hb_000465_200--Hb_000207_410 Hb_000465_200--Hb_000537_110 Hb_000465_200--Hb_003866_010 Hb_000053_090--Hb_072639_010 Hb_000053_090--Hb_008014_080 Hb_000053_090--Hb_000212_340 Hb_000053_090--Hb_000200_260 Hb_072639_010--Hb_008014_080 Hb_072639_010--Hb_000212_340 Hb_072639_010--Hb_000200_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.613534 0 1.05313 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis