Hb_003502_060

Information

Type -
Description -
Location Contig3502: 69015-73227
Sequence    

Annotation

kegg
ID rcu:RCOM_0611740
description alpha-1,3-mannosyltransferase, putative
nr
ID XP_012075820.1
description PREDICTED: alpha-1,3/1,6-mannosyltransferase ALG2 [Jatropha curcas]
swissprot
ID Q7KWM5
description Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Dictyostelium discoideum GN=alg2 PE=3 SV=1
trembl
ID A0A067KII3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10573 PE=4 SV=1
Gene Ontology
ID GO:0004378
description alpha- -mannosyltransferase alg2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36477: 69564-73225 , PASA_asmbl_36478: 70641-73160
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003502_060 0.0 - - PREDICTED: alpha-1,3/1,6-mannosyltransferase ALG2 [Jatropha curcas]
2 Hb_000030_030 0.0552533616 - - PREDICTED: ADP-glucose phosphorylase [Jatropha curcas]
3 Hb_008013_050 0.0641945417 transcription factor TF Family: PHD PREDICTED: PHD finger protein At1g33420 [Jatropha curcas]
4 Hb_002301_150 0.06464054 - - Drought-responsive family protein [Theobroma cacao]
5 Hb_089032_030 0.0664233264 - - PREDICTED: 3-isopropylmalate dehydrogenase 2, chloroplastic-like [Jatropha curcas]
6 Hb_003151_040 0.0682469221 transcription factor TF Family: Alfin-like zinc finger family protein [Populus trichocarpa]
7 Hb_015778_010 0.0745843875 - - PREDICTED: AMSH-like ubiquitin thioesterase 1 [Jatropha curcas]
8 Hb_001545_160 0.078842602 transcription factor TF Family: NAC PREDICTED: uncharacterized protein LOC102615208 isoform X1 [Citrus sinensis]
9 Hb_001703_060 0.0814081047 - - protein kinase, putative [Ricinus communis]
10 Hb_006615_240 0.0814703439 - - PREDICTED: uncharacterized protein LOC105640673 [Jatropha curcas]
11 Hb_006420_080 0.0816633685 rubber biosynthesis Gene Name: Pyruvate dehydrogenase PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial isoform X1 [Jatropha curcas]
12 Hb_002007_210 0.0822746465 - - PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Jatropha curcas]
13 Hb_005846_040 0.0827823705 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Populus euphratica]
14 Hb_021068_040 0.0829722804 - - PREDICTED: XIAP-associated factor 1 [Jatropha curcas]
15 Hb_001247_100 0.0834557356 - - PREDICTED: pyroglutamyl-peptidase 1-like protein [Jatropha curcas]
16 Hb_001766_060 0.0835838765 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004108_220 0.083907697 - - PREDICTED: mRNA-capping enzyme-like isoform X1 [Jatropha curcas]
18 Hb_000805_240 0.0852913784 - - PREDICTED: uncharacterized protein C20orf24 homolog [Jatropha curcas]
19 Hb_003582_060 0.0861567692 transcription factor TF Family: BBR-BPC PREDICTED: protein BASIC PENTACYSTEINE2-like isoform X1 [Jatropha curcas]
20 Hb_000221_190 0.0873811263 - - PREDICTED: 14-3-3-like protein [Jatropha curcas]

Gene co-expression network

sample Hb_003502_060 Hb_003502_060 Hb_000030_030 Hb_000030_030 Hb_003502_060--Hb_000030_030 Hb_008013_050 Hb_008013_050 Hb_003502_060--Hb_008013_050 Hb_002301_150 Hb_002301_150 Hb_003502_060--Hb_002301_150 Hb_089032_030 Hb_089032_030 Hb_003502_060--Hb_089032_030 Hb_003151_040 Hb_003151_040 Hb_003502_060--Hb_003151_040 Hb_015778_010 Hb_015778_010 Hb_003502_060--Hb_015778_010 Hb_005846_040 Hb_005846_040 Hb_000030_030--Hb_005846_040 Hb_001703_060 Hb_001703_060 Hb_000030_030--Hb_001703_060 Hb_002232_410 Hb_002232_410 Hb_000030_030--Hb_002232_410 Hb_000030_030--Hb_003151_040 Hb_168978_010 Hb_168978_010 Hb_000030_030--Hb_168978_010 Hb_006059_050 Hb_006059_050 Hb_008013_050--Hb_006059_050 Hb_008013_050--Hb_002301_150 Hb_008013_050--Hb_003151_040 Hb_010098_050 Hb_010098_050 Hb_008013_050--Hb_010098_050 Hb_008013_050--Hb_000030_030 Hb_004108_220 Hb_004108_220 Hb_002301_150--Hb_004108_220 Hb_002301_150--Hb_000030_030 Hb_006846_130 Hb_006846_130 Hb_002301_150--Hb_006846_130 Hb_002301_150--Hb_168978_010 Hb_010812_120 Hb_010812_120 Hb_089032_030--Hb_010812_120 Hb_003349_090 Hb_003349_090 Hb_089032_030--Hb_003349_090 Hb_009615_070 Hb_009615_070 Hb_089032_030--Hb_009615_070 Hb_010423_030 Hb_010423_030 Hb_089032_030--Hb_010423_030 Hb_001545_170 Hb_001545_170 Hb_089032_030--Hb_001545_170 Hb_003151_040--Hb_005846_040 Hb_001766_060 Hb_001766_060 Hb_003151_040--Hb_001766_060 Hb_000373_070 Hb_000373_070 Hb_003151_040--Hb_000373_070 Hb_003151_040--Hb_006059_050 Hb_000152_500 Hb_000152_500 Hb_003151_040--Hb_000152_500 Hb_000001_060 Hb_000001_060 Hb_003151_040--Hb_000001_060 Hb_002007_210 Hb_002007_210 Hb_015778_010--Hb_002007_210 Hb_006420_080 Hb_006420_080 Hb_015778_010--Hb_006420_080 Hb_000414_130 Hb_000414_130 Hb_015778_010--Hb_000414_130 Hb_005306_180 Hb_005306_180 Hb_015778_010--Hb_005306_180 Hb_011344_190 Hb_011344_190 Hb_015778_010--Hb_011344_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.98958 4.47069 4.12182 6.11681 2.27924 3.76185
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.14552 7.52167 6.43776 4.49934 3.75962

CAGE analysis