Hb_003506_080

Information

Type -
Description -
Location Contig3506: 94236-99851
Sequence    

Annotation

kegg
ID rcu:RCOM_1243220
description dipeptidyl peptidase IV, putative (EC:3.4.14.5)
nr
ID XP_002516684.1
description dipeptidyl peptidase IV, putative [Ricinus communis]
swissprot
ID Q80YA7
description Dipeptidyl peptidase 8 OS=Mus musculus GN=Dpp8 PE=2 SV=1
trembl
ID B9RSG5
description Dipeptidyl peptidase IV, putative OS=Ricinus communis GN=RCOM_1243220 PE=4 SV=1
Gene Ontology
ID GO:0016020
description dipeptidyl peptidase 9-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003506_080 0.0 - - dipeptidyl peptidase IV, putative [Ricinus communis]
2 Hb_007108_030 0.0828312036 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
3 Hb_000977_180 0.0838546704 - - PREDICTED: splicing factor U2AF-associated protein 2 isoform X1 [Jatropha curcas]
4 Hb_009620_040 0.0846688149 - - PREDICTED: cyclin-T1-3-like [Jatropha curcas]
5 Hb_000815_210 0.0870344744 - - uncoupling protein 3, partial [Manihot esculenta]
6 Hb_001866_110 0.0871124498 - - PREDICTED: trihelix transcription factor GT-3b-like [Jatropha curcas]
7 Hb_002079_010 0.0876913693 - - hypothetical protein POPTR_0001s01970g [Populus trichocarpa]
8 Hb_000358_150 0.0878486153 - - hypothetical protein VITISV_012309 [Vitis vinifera]
9 Hb_000538_200 0.0902543277 - - PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like [Jatropha curcas]
10 Hb_002150_030 0.0905459268 - - PREDICTED: protein SPA1-RELATED 2 [Jatropha curcas]
11 Hb_003097_150 0.0931079596 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Jatropha curcas]
12 Hb_001252_080 0.0941917299 - - PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Jatropha curcas]
13 Hb_001019_060 0.0956987816 - - PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Jatropha curcas]
14 Hb_002007_250 0.0971760746 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000429_200 0.0974546615 - - PREDICTED: DNA-binding protein SMUBP-2 [Jatropha curcas]
16 Hb_001157_060 0.0976758647 - - PREDICTED: putative nitric oxide synthase [Jatropha curcas]
17 Hb_000160_040 0.0984771975 - - PREDICTED: methyltransferase-like protein 10 [Jatropha curcas]
18 Hb_004600_040 0.0988684493 - - -
19 Hb_000179_020 0.0990097847 - - amidase, putative [Ricinus communis]
20 Hb_005214_160 0.0994297535 - - PREDICTED: heat shock 70 kDa protein, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_003506_080 Hb_003506_080 Hb_007108_030 Hb_007108_030 Hb_003506_080--Hb_007108_030 Hb_000977_180 Hb_000977_180 Hb_003506_080--Hb_000977_180 Hb_009620_040 Hb_009620_040 Hb_003506_080--Hb_009620_040 Hb_000815_210 Hb_000815_210 Hb_003506_080--Hb_000815_210 Hb_001866_110 Hb_001866_110 Hb_003506_080--Hb_001866_110 Hb_002079_010 Hb_002079_010 Hb_003506_080--Hb_002079_010 Hb_002150_030 Hb_002150_030 Hb_007108_030--Hb_002150_030 Hb_009411_010 Hb_009411_010 Hb_007108_030--Hb_009411_010 Hb_001797_050 Hb_001797_050 Hb_007108_030--Hb_001797_050 Hb_003428_070 Hb_003428_070 Hb_007108_030--Hb_003428_070 Hb_007108_030--Hb_001866_110 Hb_007586_030 Hb_007586_030 Hb_000977_180--Hb_007586_030 Hb_000977_180--Hb_002150_030 Hb_123777_030 Hb_123777_030 Hb_000977_180--Hb_123777_030 Hb_005214_160 Hb_005214_160 Hb_000977_180--Hb_005214_160 Hb_005977_090 Hb_005977_090 Hb_000977_180--Hb_005977_090 Hb_007364_010 Hb_007364_010 Hb_000977_180--Hb_007364_010 Hb_002097_090 Hb_002097_090 Hb_009620_040--Hb_002097_090 Hb_000160_040 Hb_000160_040 Hb_009620_040--Hb_000160_040 Hb_000236_370 Hb_000236_370 Hb_009620_040--Hb_000236_370 Hb_004934_090 Hb_004934_090 Hb_009620_040--Hb_004934_090 Hb_000173_510 Hb_000173_510 Hb_009620_040--Hb_000173_510 Hb_000645_150 Hb_000645_150 Hb_009620_040--Hb_000645_150 Hb_000051_070 Hb_000051_070 Hb_000815_210--Hb_000051_070 Hb_000538_200 Hb_000538_200 Hb_000815_210--Hb_000538_200 Hb_003406_010 Hb_003406_010 Hb_000815_210--Hb_003406_010 Hb_004600_040 Hb_004600_040 Hb_000815_210--Hb_004600_040 Hb_011673_030 Hb_011673_030 Hb_000815_210--Hb_011673_030 Hb_000608_030 Hb_000608_030 Hb_000815_210--Hb_000608_030 Hb_000429_120 Hb_000429_120 Hb_001866_110--Hb_000429_120 Hb_001866_110--Hb_005977_090 Hb_000179_020 Hb_000179_020 Hb_001866_110--Hb_000179_020 Hb_002174_060 Hb_002174_060 Hb_001866_110--Hb_002174_060 Hb_001866_110--Hb_003428_070 Hb_000889_020 Hb_000889_020 Hb_001866_110--Hb_000889_020 Hb_000103_180 Hb_000103_180 Hb_002079_010--Hb_000103_180 Hb_002030_030 Hb_002030_030 Hb_002079_010--Hb_002030_030 Hb_007426_030 Hb_007426_030 Hb_002079_010--Hb_007426_030 Hb_006400_060 Hb_006400_060 Hb_002079_010--Hb_006400_060 Hb_063090_010 Hb_063090_010 Hb_002079_010--Hb_063090_010 Hb_002079_010--Hb_000179_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.72702 1.55772 1.01198 1.12394 5.90072 5.60254
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.52477 2.98008 2.82875 2.615 1.67838

CAGE analysis