Hb_003529_210

Information

Type -
Description -
Location Contig3529: 225418-225838
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003529_210 0.0 - - -
2 Hb_066784_020 0.0571190691 - - conserved hypothetical protein [Ricinus communis]
3 Hb_064951_010 0.1181801184 - - PREDICTED: uncharacterized protein LOC103699089, partial [Phoenix dactylifera]
4 Hb_001899_010 0.1298711666 - - PREDICTED: probable ubiquitin conjugation factor E4 isoform X2 [Jatropha curcas]
5 Hb_067345_050 0.1358141478 - - PREDICTED: uncharacterized protein LOC104107076 [Nicotiana tomentosiformis]
6 Hb_076583_010 0.1510122143 - - hypothetical protein JCGZ_17827 [Jatropha curcas]
7 Hb_179763_010 0.1541330471 - - -
8 Hb_001135_270 0.1591471706 - - -
9 Hb_005799_030 0.1610233521 - - PREDICTED: uncharacterized protein LOC103926623 [Pyrus x bretschneideri]
10 Hb_013205_010 0.1940298114 - - PREDICTED: putative B3 domain-containing protein At2g27410 [Jatropha curcas]
11 Hb_027394_010 0.1942679472 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
12 Hb_068347_020 0.1942720892 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
13 Hb_009066_010 0.1953250112 - - -
14 Hb_021068_020 0.200875744 - - -
15 Hb_081636_010 0.2014850557 - - -
16 Hb_010399_020 0.2025402934 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
17 Hb_008151_030 0.2038753202 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
18 Hb_034667_010 0.2062363266 - - -
19 Hb_136856_010 0.2071653369 - - PREDICTED: uncharacterized protein LOC105436302 [Cucumis sativus]
20 Hb_000260_190 0.2078345574 - - -

Gene co-expression network

sample Hb_003529_210 Hb_003529_210 Hb_066784_020 Hb_066784_020 Hb_003529_210--Hb_066784_020 Hb_064951_010 Hb_064951_010 Hb_003529_210--Hb_064951_010 Hb_001899_010 Hb_001899_010 Hb_003529_210--Hb_001899_010 Hb_067345_050 Hb_067345_050 Hb_003529_210--Hb_067345_050 Hb_076583_010 Hb_076583_010 Hb_003529_210--Hb_076583_010 Hb_179763_010 Hb_179763_010 Hb_003529_210--Hb_179763_010 Hb_066784_020--Hb_067345_050 Hb_066784_020--Hb_064951_010 Hb_066784_020--Hb_076583_010 Hb_066784_020--Hb_001899_010 Hb_001135_270 Hb_001135_270 Hb_066784_020--Hb_001135_270 Hb_064951_010--Hb_076583_010 Hb_010997_050 Hb_010997_050 Hb_064951_010--Hb_010997_050 Hb_089491_010 Hb_089491_010 Hb_064951_010--Hb_089491_010 Hb_009268_110 Hb_009268_110 Hb_064951_010--Hb_009268_110 Hb_005799_030 Hb_005799_030 Hb_001899_010--Hb_005799_030 Hb_001899_010--Hb_001135_270 Hb_001899_010--Hb_179763_010 Hb_003529_220 Hb_003529_220 Hb_001899_010--Hb_003529_220 Hb_067345_050--Hb_001135_270 Hb_081636_010 Hb_081636_010 Hb_067345_050--Hb_081636_010 Hb_067345_050--Hb_005799_030 Hb_182310_010 Hb_182310_010 Hb_067345_050--Hb_182310_010 Hb_076583_010--Hb_010997_050 Hb_076583_010--Hb_009268_110 Hb_076583_010--Hb_089491_010 Hb_013727_010 Hb_013727_010 Hb_076583_010--Hb_013727_010 Hb_179763_010--Hb_005799_030 Hb_179763_010--Hb_001135_270 Hb_001584_230 Hb_001584_230 Hb_179763_010--Hb_001584_230 Hb_179763_010--Hb_003529_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.190341 0 0 0 1.02179 1.48193
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis