Hb_003573_030

Information

Type -
Description -
Location Contig3573: 12388-13944
Sequence    

Annotation

kegg
ID rcu:RCOM_1064670
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_012072814.1
description PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
swissprot
ID Q9FVS9
description Alkane hydroxylase MAH1 OS=Arabidopsis thaliana GN=CYP96A15 PE=2 SV=1
trembl
ID A0A067LGD1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10248 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 86b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003573_030 0.0 - - PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
2 Hb_000281_120 0.0385516335 - - protein binding protein, putative [Ricinus communis]
3 Hb_000697_030 0.0387181892 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like [Pyrus x bretschneideri]
4 Hb_003651_030 0.0393236261 - - lyase, putative [Ricinus communis]
5 Hb_000210_030 0.0410126865 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP6 [Jatropha curcas]
6 Hb_000069_220 0.0422040713 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF023 [Jatropha curcas]
7 Hb_000530_040 0.0461365446 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG2 isoform X1 [Jatropha curcas]
8 Hb_001975_120 0.051898765 - - chlorophyll a/b binding protein type II [Glycine max]
9 Hb_001675_090 0.0563262646 - - Photosystem I reaction center subunit VI, chloroplast precursor, putative [Ricinus communis]
10 Hb_002818_110 0.0569953525 transcription factor TF Family: bHLH hypothetical protein RCOM_1343120 [Ricinus communis]
11 Hb_001424_010 0.0580294005 - - serine/threonine protein kinase, putative [Ricinus communis]
12 Hb_006573_110 0.0669268772 - - PREDICTED: uncharacterized protein PAM68-like [Jatropha curcas]
13 Hb_005345_020 0.0670519224 - - Root phototropism protein, putative [Ricinus communis]
14 Hb_002805_200 0.0691810567 - - PREDICTED: serine--glyoxylate aminotransferase [Nelumbo nucifera]
15 Hb_000262_090 0.0696975928 - - Root phototropism protein, putative [Ricinus communis]
16 Hb_008013_020 0.0710495317 - - PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Jatropha curcas]
17 Hb_003921_020 0.0714056499 - - hypothetical protein JCGZ_10628 [Jatropha curcas]
18 Hb_009476_030 0.0733704451 - - fatty acid desaturase [Manihot esculenta]
19 Hb_016371_010 0.0736492627 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
20 Hb_004411_010 0.0746158667 - - PREDICTED: NADP-dependent alkenal double bond reductase P2-like isoform X5 [Gossypium raimondii]

Gene co-expression network

sample Hb_003573_030 Hb_003573_030 Hb_000281_120 Hb_000281_120 Hb_003573_030--Hb_000281_120 Hb_000697_030 Hb_000697_030 Hb_003573_030--Hb_000697_030 Hb_003651_030 Hb_003651_030 Hb_003573_030--Hb_003651_030 Hb_000210_030 Hb_000210_030 Hb_003573_030--Hb_000210_030 Hb_000069_220 Hb_000069_220 Hb_003573_030--Hb_000069_220 Hb_000530_040 Hb_000530_040 Hb_003573_030--Hb_000530_040 Hb_000281_120--Hb_003651_030 Hb_002805_200 Hb_002805_200 Hb_000281_120--Hb_002805_200 Hb_000281_120--Hb_000210_030 Hb_000340_280 Hb_000340_280 Hb_000281_120--Hb_000340_280 Hb_003921_020 Hb_003921_020 Hb_000281_120--Hb_003921_020 Hb_000697_030--Hb_000069_220 Hb_000697_030--Hb_000530_040 Hb_001424_010 Hb_001424_010 Hb_000697_030--Hb_001424_010 Hb_004411_010 Hb_004411_010 Hb_000697_030--Hb_004411_010 Hb_001975_120 Hb_001975_120 Hb_000697_030--Hb_001975_120 Hb_003651_030--Hb_002805_200 Hb_003651_030--Hb_000210_030 Hb_003651_030--Hb_000340_280 Hb_000359_050 Hb_000359_050 Hb_003651_030--Hb_000359_050 Hb_000262_090 Hb_000262_090 Hb_000210_030--Hb_000262_090 Hb_002818_110 Hb_002818_110 Hb_000210_030--Hb_002818_110 Hb_001675_090 Hb_001675_090 Hb_000210_030--Hb_001675_090 Hb_000821_030 Hb_000821_030 Hb_000210_030--Hb_000821_030 Hb_006573_110 Hb_006573_110 Hb_000210_030--Hb_006573_110 Hb_000069_220--Hb_004411_010 Hb_007853_030 Hb_007853_030 Hb_000069_220--Hb_007853_030 Hb_000069_220--Hb_000530_040 Hb_000069_220--Hb_000210_030 Hb_000530_040--Hb_001424_010 Hb_000530_040--Hb_001975_120 Hb_078954_030 Hb_078954_030 Hb_000530_040--Hb_078954_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.510294 9.91036 2.63859 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0105966 8.35413

CAGE analysis