Hb_003576_050

Information

Type transcription factor
Description TF Family: EIL
Location Contig3576: 44903-47538
Sequence    

Annotation

kegg
ID rcu:RCOM_0656830
description ETHYLENE-INSENSITIVE3 protein, putative
nr
ID XP_002530192.1
description ETHYLENE-INSENSITIVE3 protein, putative [Ricinus communis]
swissprot
ID O24606
description Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thaliana GN=EIN3 PE=1 SV=1
trembl
ID B9SW23
description ETHYLENE-INSENSITIVE3 protein, putative OS=Ricinus communis GN=RCOM_0656830 PE=4 SV=1
Gene Ontology
ID GO:0005634
description protein ethylene insensitive 3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36855: 43913-47190
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003576_050 0.0 transcription factor TF Family: EIL ETHYLENE-INSENSITIVE3 protein, putative [Ricinus communis]
2 Hb_009823_010 0.0930151831 - - PREDICTED: uncharacterized protein LOC105633096 [Jatropha curcas]
3 Hb_003517_020 0.1164197606 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter C family member 3-like [Jatropha curcas]
4 Hb_001408_050 0.1217984117 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000313_370 0.1322780147 - - ABC transporter family protein [Hevea brasiliensis]
6 Hb_001248_030 0.1322829012 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_000928_040 0.1323789765 - - cytochrome P450, putative [Ricinus communis]
8 Hb_000098_310 0.1337166542 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
9 Hb_001021_030 0.1351594447 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
10 Hb_117168_010 0.1360517835 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
11 Hb_000976_440 0.138768672 - - UDP-glucosyltransferase, putative [Ricinus communis]
12 Hb_007919_040 0.1419653897 - - PREDICTED: protein LYK5 [Jatropha curcas]
13 Hb_000638_090 0.1423879079 - - ABC transporter family protein [Hevea brasiliensis]
14 Hb_002662_090 0.1468781065 - - PREDICTED: probable inactive receptor kinase At5g67200 [Jatropha curcas]
15 Hb_000367_310 0.1533609188 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
16 Hb_000762_070 0.1550570982 transcription factor TF Family: MYB PREDICTED: transcription factor WER-like [Jatropha curcas]
17 Hb_002928_120 0.1571901166 - - 1,4-alpha-glucan branching enzyme [Manihot esculenta]
18 Hb_002928_180 0.1580501974 - - catalase CAT1 [Manihot esculenta]
19 Hb_004316_030 0.1585510658 - - hypothetical protein JCGZ_23475 [Jatropha curcas]
20 Hb_002030_170 0.1592554296 - - PREDICTED: calcium-transporting ATPase 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_003576_050 Hb_003576_050 Hb_009823_010 Hb_009823_010 Hb_003576_050--Hb_009823_010 Hb_003517_020 Hb_003517_020 Hb_003576_050--Hb_003517_020 Hb_001408_050 Hb_001408_050 Hb_003576_050--Hb_001408_050 Hb_000313_370 Hb_000313_370 Hb_003576_050--Hb_000313_370 Hb_001248_030 Hb_001248_030 Hb_003576_050--Hb_001248_030 Hb_000928_040 Hb_000928_040 Hb_003576_050--Hb_000928_040 Hb_000976_440 Hb_000976_440 Hb_009823_010--Hb_000976_440 Hb_009823_010--Hb_001408_050 Hb_000181_160 Hb_000181_160 Hb_009823_010--Hb_000181_160 Hb_000638_090 Hb_000638_090 Hb_009823_010--Hb_000638_090 Hb_000098_310 Hb_000098_310 Hb_009823_010--Hb_000098_310 Hb_003517_020--Hb_000313_370 Hb_003517_020--Hb_000928_040 Hb_000702_060 Hb_000702_060 Hb_003517_020--Hb_000702_060 Hb_007919_040 Hb_007919_040 Hb_003517_020--Hb_007919_040 Hb_002524_030 Hb_002524_030 Hb_003517_020--Hb_002524_030 Hb_003453_030 Hb_003453_030 Hb_001408_050--Hb_003453_030 Hb_001408_050--Hb_000181_160 Hb_001678_030 Hb_001678_030 Hb_001408_050--Hb_001678_030 Hb_001408_050--Hb_000638_090 Hb_000977_010 Hb_000977_010 Hb_000313_370--Hb_000977_010 Hb_002030_170 Hb_002030_170 Hb_000313_370--Hb_002030_170 Hb_001946_150 Hb_001946_150 Hb_000313_370--Hb_001946_150 Hb_000362_110 Hb_000362_110 Hb_000313_370--Hb_000362_110 Hb_007416_150 Hb_007416_150 Hb_001248_030--Hb_007416_150 Hb_001248_030--Hb_009823_010 Hb_001248_030--Hb_001408_050 Hb_001248_030--Hb_000638_090 Hb_002304_140 Hb_002304_140 Hb_001248_030--Hb_002304_140 Hb_000645_210 Hb_000645_210 Hb_000928_040--Hb_000645_210 Hb_000367_310 Hb_000367_310 Hb_000928_040--Hb_000367_310 Hb_000928_040--Hb_007919_040 Hb_000093_150 Hb_000093_150 Hb_000928_040--Hb_000093_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
34.8219 299.415 53.5597 164.575 29.8036 34.7901
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.3178 32.7926 24.4431 535.023 70.3201

CAGE analysis