Hb_003582_010

Information

Type -
Description -
Location Contig3582: 15281-16710
Sequence    

Annotation

kegg
ID gmx:100812826
description methylecgonone reductase-like
nr
ID KCW85939.1
description hypothetical protein EUGRSUZ_B026451, partial [Eucalyptus grandis]
swissprot
ID -
description -
trembl
ID A0A059D668
description Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_B026451 PE=4 SV=1
Gene Ontology
ID GO:0016491
description non-functional nadph-dependent codeinone reductase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003582_010 0.0 - - hypothetical protein EUGRSUZ_B026451, partial [Eucalyptus grandis]
2 Hb_008385_010 0.109707915 - - sulfate transporter, putative [Ricinus communis]
3 Hb_001013_070 0.1117906534 - - -
4 Hb_002511_050 0.1170002232 - - ATP binding protein, putative [Ricinus communis]
5 Hb_000705_070 0.1231965941 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001322_010 0.1262662376 - - PREDICTED: uncharacterized protein LOC105632322 [Jatropha curcas]
7 Hb_001013_060 0.1262811338 - - -
8 Hb_001775_060 0.1293465984 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000840_220 0.1304135061 - - PREDICTED: RING-H2 finger protein ATL78-like [Jatropha curcas]
10 Hb_022597_010 0.1334640479 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 13 [Vitis vinifera]
11 Hb_000860_030 0.1367702541 - - conserved hypothetical protein [Ricinus communis]
12 Hb_004757_040 0.1388651001 - - -
13 Hb_000638_110 0.1411077585 transcription factor TF Family: NAC hypothetical protein POPTR_0007s04250g [Populus trichocarpa]
14 Hb_156850_040 0.141673116 - - PREDICTED: uncharacterized protein LOC105635251 [Jatropha curcas]
15 Hb_000616_100 0.1472085414 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
16 Hb_001255_030 0.1479212377 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840, partial [Sesamum indicum]
17 Hb_000174_020 0.1484555365 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
18 Hb_001645_100 0.1507261273 - - -
19 Hb_005373_030 0.154168378 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000563_570 0.1543970343 - - hypothetical protein JCGZ_18895 [Jatropha curcas]

Gene co-expression network

sample Hb_003582_010 Hb_003582_010 Hb_008385_010 Hb_008385_010 Hb_003582_010--Hb_008385_010 Hb_001013_070 Hb_001013_070 Hb_003582_010--Hb_001013_070 Hb_002511_050 Hb_002511_050 Hb_003582_010--Hb_002511_050 Hb_000705_070 Hb_000705_070 Hb_003582_010--Hb_000705_070 Hb_001322_010 Hb_001322_010 Hb_003582_010--Hb_001322_010 Hb_001013_060 Hb_001013_060 Hb_003582_010--Hb_001013_060 Hb_008385_010--Hb_002511_050 Hb_001645_100 Hb_001645_100 Hb_008385_010--Hb_001645_100 Hb_008385_010--Hb_001013_070 Hb_005900_020 Hb_005900_020 Hb_008385_010--Hb_005900_020 Hb_050229_030 Hb_050229_030 Hb_008385_010--Hb_050229_030 Hb_005373_030 Hb_005373_030 Hb_001013_070--Hb_005373_030 Hb_003212_030 Hb_003212_030 Hb_001013_070--Hb_003212_030 Hb_033153_030 Hb_033153_030 Hb_001013_070--Hb_033153_030 Hb_001013_070--Hb_050229_030 Hb_000445_480 Hb_000445_480 Hb_001013_070--Hb_000445_480 Hb_010926_020 Hb_010926_020 Hb_002511_050--Hb_010926_020 Hb_001529_010 Hb_001529_010 Hb_002511_050--Hb_001529_010 Hb_002511_050--Hb_000445_480 Hb_005736_010 Hb_005736_010 Hb_002511_050--Hb_005736_010 Hb_000705_070--Hb_001322_010 Hb_000860_030 Hb_000860_030 Hb_000705_070--Hb_000860_030 Hb_000840_220 Hb_000840_220 Hb_000705_070--Hb_000840_220 Hb_000638_110 Hb_000638_110 Hb_000705_070--Hb_000638_110 Hb_001775_060 Hb_001775_060 Hb_000705_070--Hb_001775_060 Hb_022597_010 Hb_022597_010 Hb_001322_010--Hb_022597_010 Hb_001322_010--Hb_000860_030 Hb_156850_040 Hb_156850_040 Hb_001322_010--Hb_156850_040 Hb_001322_010--Hb_000638_110 Hb_000740_080 Hb_000740_080 Hb_001322_010--Hb_000740_080 Hb_000203_150 Hb_000203_150 Hb_001013_060--Hb_000203_150 Hb_001610_060 Hb_001610_060 Hb_001013_060--Hb_001610_060 Hb_001013_060--Hb_000840_220 Hb_000563_570 Hb_000563_570 Hb_001013_060--Hb_000563_570 Hb_000720_060 Hb_000720_060 Hb_001013_060--Hb_000720_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.500425 14.3945 1.6492 59.4528 0.163568 0.154897
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 7.52255 0.974526

CAGE analysis