Hb_003605_070

Information

Type -
Description -
Location Contig3605: 55989-62977
Sequence    

Annotation

kegg
ID csv:101211245
description vegetative incompatibility protein HET-E-1-like
nr
ID XP_012082906.1
description PREDICTED: angio-associated migratory cell protein [Jatropha curcas]
swissprot
ID Q7YR70
description Angio-associated migratory cell protein OS=Canis familiaris GN=AAMP PE=3 SV=1
trembl
ID A0A067LM41
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09723 PE=4 SV=1
Gene Ontology
ID GO:0005515
description angio-associated migratory cell protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37132: 56065-62930
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003605_070 0.0 - - PREDICTED: angio-associated migratory cell protein [Jatropha curcas]
2 Hb_005288_160 0.0757334003 - - PREDICTED: uncharacterized protein LOC105647746 isoform X1 [Jatropha curcas]
3 Hb_000209_090 0.078956353 - - PREDICTED: 60S ribosomal protein L7-2-like [Jatropha curcas]
4 Hb_001623_580 0.0789912481 - - PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Jatropha curcas]
5 Hb_001016_060 0.0842814323 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002276_190 0.0890363802 - - PREDICTED: uncharacterized protein LOC105640686 [Jatropha curcas]
7 Hb_000847_070 0.0903165972 - - PREDICTED: uncharacterized protein LOC105125699 [Populus euphratica]
8 Hb_000976_270 0.0910995703 - - PREDICTED: uncharacterized protein LOC105646226 [Jatropha curcas]
9 Hb_003384_030 0.0917058731 - - PREDICTED: eukaryotic translation initiation factor 2 subunit beta-like [Jatropha curcas]
10 Hb_004032_050 0.0919288605 - - hypothetical protein CISIN_1g014592mg [Citrus sinensis]
11 Hb_004096_170 0.0933695782 - - PREDICTED: uncharacterized protein DDB_G0275933 [Jatropha curcas]
12 Hb_003453_020 0.0945861932 - - PREDICTED: histidine biosynthesis bifunctional protein hisIE, chloroplastic [Jatropha curcas]
13 Hb_000768_030 0.0947310284 - - PREDICTED: ELMO domain-containing protein A isoform X1 [Jatropha curcas]
14 Hb_000997_020 0.0983414465 - - PREDICTED: uncharacterized protein LOC105629694 [Jatropha curcas]
15 Hb_000692_260 0.0984783783 - - PREDICTED: uncharacterized protein LOC105635282 [Jatropha curcas]
16 Hb_001741_140 0.0987902726 - - PREDICTED: 60S ribosomal protein L7-2-like [Jatropha curcas]
17 Hb_001663_110 0.0988264849 - - RNA binding protein, putative [Ricinus communis]
18 Hb_000284_200 0.1005017319 - - -
19 Hb_001514_200 0.1014873104 - - PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Jatropha curcas]
20 Hb_003126_040 0.1036833672 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_003605_070 Hb_003605_070 Hb_005288_160 Hb_005288_160 Hb_003605_070--Hb_005288_160 Hb_000209_090 Hb_000209_090 Hb_003605_070--Hb_000209_090 Hb_001623_580 Hb_001623_580 Hb_003605_070--Hb_001623_580 Hb_001016_060 Hb_001016_060 Hb_003605_070--Hb_001016_060 Hb_002276_190 Hb_002276_190 Hb_003605_070--Hb_002276_190 Hb_000847_070 Hb_000847_070 Hb_003605_070--Hb_000847_070 Hb_000733_060 Hb_000733_060 Hb_005288_160--Hb_000733_060 Hb_023226_060 Hb_023226_060 Hb_005288_160--Hb_023226_060 Hb_128548_020 Hb_128548_020 Hb_005288_160--Hb_128548_020 Hb_002631_050 Hb_002631_050 Hb_005288_160--Hb_002631_050 Hb_003453_020 Hb_003453_020 Hb_005288_160--Hb_003453_020 Hb_000976_270 Hb_000976_270 Hb_000209_090--Hb_000976_270 Hb_001741_140 Hb_001741_140 Hb_000209_090--Hb_001741_140 Hb_007534_040 Hb_007534_040 Hb_000209_090--Hb_007534_040 Hb_004044_020 Hb_004044_020 Hb_000209_090--Hb_004044_020 Hb_004525_100 Hb_004525_100 Hb_000209_090--Hb_004525_100 Hb_004032_050 Hb_004032_050 Hb_001623_580--Hb_004032_050 Hb_001623_580--Hb_002276_190 Hb_001623_580--Hb_005288_160 Hb_001623_580--Hb_000209_090 Hb_000284_200 Hb_000284_200 Hb_001623_580--Hb_000284_200 Hb_006173_020 Hb_006173_020 Hb_001016_060--Hb_006173_020 Hb_002149_040 Hb_002149_040 Hb_001016_060--Hb_002149_040 Hb_000692_260 Hb_000692_260 Hb_001016_060--Hb_000692_260 Hb_005016_030 Hb_005016_030 Hb_001016_060--Hb_005016_030 Hb_000363_340 Hb_000363_340 Hb_001016_060--Hb_000363_340 Hb_002276_190--Hb_004032_050 Hb_000175_490 Hb_000175_490 Hb_002276_190--Hb_000175_490 Hb_002276_190--Hb_005288_160 Hb_000768_030 Hb_000768_030 Hb_002276_190--Hb_000768_030 Hb_004096_170 Hb_004096_170 Hb_000847_070--Hb_004096_170 Hb_001514_020 Hb_001514_020 Hb_000847_070--Hb_001514_020 Hb_004502_030 Hb_004502_030 Hb_000847_070--Hb_004502_030 Hb_007992_030 Hb_007992_030 Hb_000847_070--Hb_007992_030 Hb_134226_010 Hb_134226_010 Hb_000847_070--Hb_134226_010 Hb_006637_060 Hb_006637_060 Hb_000847_070--Hb_006637_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
75.4135 17.1653 16.1992 9.24051 98.342 76.7819
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
34.907 47.8852 30.4087 19.9176 4.84513

CAGE analysis