Hb_003622_040

Information

Type -
Description -
Location Contig3622: 63458-66618
Sequence    

Annotation

kegg
ID tcc:TCM_024386
description Tetratricopeptide repeat (TPR)-like superfamily protein
nr
ID XP_012085991.1
description PREDICTED: mitochondrial fission 1 protein A [Jatropha curcas]
swissprot
ID Q9M1J1
description Mitochondrial fission 1 protein A OS=Arabidopsis thaliana GN=FIS1A PE=1 SV=1
trembl
ID A0A067K1X4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22481 PE=4 SV=1
Gene Ontology
ID GO:0009507
description mitochondrial fission 1 protein a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003622_040 0.0 - - PREDICTED: mitochondrial fission 1 protein A [Jatropha curcas]
2 Hb_001123_160 0.0630601416 rubber biosynthesis Gene Name: Pyruvate dehydrogenase PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial isoform X2 [Jatropha curcas]
3 Hb_005054_210 0.071075038 - - hypothetical protein PRUPE_ppa026456mg [Prunus persica]
4 Hb_000934_190 0.0721893335 - - SER/ARG-rich protein 34A [Theobroma cacao]
5 Hb_000300_430 0.0728679209 - - PREDICTED: double-stranded RNA-binding protein 1-like [Jatropha curcas]
6 Hb_008232_010 0.0758896202 transcription factor TF Family: C2C2-GATA GATA transcription factor, putative [Ricinus communis]
7 Hb_011344_190 0.0770853912 - - PREDICTED: maspardin [Jatropha curcas]
8 Hb_000920_200 0.0798820036 - - PREDICTED: E3 ubiquitin-protein ligase SINAT5-like isoform X1 [Jatropha curcas]
9 Hb_000982_080 0.0811037156 desease resistance Gene Name: AAA PREDICTED: 26S proteasome regulatory subunit 4 homolog A [Jatropha curcas]
10 Hb_001218_030 0.085745281 - - PREDICTED: uncharacterized protein LOC105630612 [Jatropha curcas]
11 Hb_000173_410 0.0891130148 - - PREDICTED: BI1-like protein [Jatropha curcas]
12 Hb_002119_130 0.0906342182 - - PREDICTED: uncharacterized protein LOC105634169 [Jatropha curcas]
13 Hb_000413_280 0.090940711 - - PREDICTED: probable UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial [Jatropha curcas]
14 Hb_000820_090 0.0916144268 - - -
15 Hb_006420_080 0.0917165601 rubber biosynthesis Gene Name: Pyruvate dehydrogenase PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial isoform X1 [Jatropha curcas]
16 Hb_000174_210 0.0920852376 - - latex cyanogenic beta glucosidase [Hevea brasiliensis]
17 Hb_000419_070 0.0933679662 - - V-type proton ATPase subunit G 1 [Jatropha curcas]
18 Hb_000571_020 0.0944720389 - - PREDICTED: BAG family molecular chaperone regulator 4 isoform X1 [Jatropha curcas]
19 Hb_003360_040 0.095143117 - - PREDICTED: uncharacterized protein LOC105634704 [Jatropha curcas]
20 Hb_002016_080 0.0970404123 - - PREDICTED: thiamine pyrophosphokinase 1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_003622_040 Hb_003622_040 Hb_001123_160 Hb_001123_160 Hb_003622_040--Hb_001123_160 Hb_005054_210 Hb_005054_210 Hb_003622_040--Hb_005054_210 Hb_000934_190 Hb_000934_190 Hb_003622_040--Hb_000934_190 Hb_000300_430 Hb_000300_430 Hb_003622_040--Hb_000300_430 Hb_008232_010 Hb_008232_010 Hb_003622_040--Hb_008232_010 Hb_011344_190 Hb_011344_190 Hb_003622_040--Hb_011344_190 Hb_001123_160--Hb_008232_010 Hb_003291_020 Hb_003291_020 Hb_001123_160--Hb_003291_020 Hb_148209_010 Hb_148209_010 Hb_001123_160--Hb_148209_010 Hb_000563_200 Hb_000563_200 Hb_001123_160--Hb_000563_200 Hb_001123_160--Hb_000300_430 Hb_000174_210 Hb_000174_210 Hb_005054_210--Hb_000174_210 Hb_005765_050 Hb_005765_050 Hb_005054_210--Hb_005765_050 Hb_148121_040 Hb_148121_040 Hb_005054_210--Hb_148121_040 Hb_076233_040 Hb_076233_040 Hb_005054_210--Hb_076233_040 Hb_000045_310 Hb_000045_310 Hb_005054_210--Hb_000045_310 Hb_000673_020 Hb_000673_020 Hb_000934_190--Hb_000673_020 Hb_005098_030 Hb_005098_030 Hb_000934_190--Hb_005098_030 Hb_000934_190--Hb_008232_010 Hb_000982_080 Hb_000982_080 Hb_000934_190--Hb_000982_080 Hb_003462_120 Hb_003462_120 Hb_000934_190--Hb_003462_120 Hb_004800_100 Hb_004800_100 Hb_000300_430--Hb_004800_100 Hb_000300_430--Hb_000982_080 Hb_000300_430--Hb_011344_190 Hb_000173_410 Hb_000173_410 Hb_000300_430--Hb_000173_410 Hb_008232_010--Hb_000982_080 Hb_008232_010--Hb_011344_190 Hb_004672_010 Hb_004672_010 Hb_008232_010--Hb_004672_010 Hb_015183_060 Hb_015183_060 Hb_008232_010--Hb_015183_060 Hb_011344_190--Hb_000982_080 Hb_003376_250 Hb_003376_250 Hb_011344_190--Hb_003376_250 Hb_005488_200 Hb_005488_200 Hb_011344_190--Hb_005488_200 Hb_003633_050 Hb_003633_050 Hb_011344_190--Hb_003633_050 Hb_001222_080 Hb_001222_080 Hb_011344_190--Hb_001222_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.91196 1.76577 3.68581 5.5379 2.30241 1.5494
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.93273 6.70327 6.29559 4.82479 3.41434

CAGE analysis