Hb_003638_040

Information

Type -
Description -
Location Contig3638: 70388-79476
Sequence    

Annotation

kegg
ID rcu:RCOM_1686850
description kinesin heavy chain, putative
nr
ID XP_002509807.1
description kinesin heavy chain, putative [Ricinus communis]
swissprot
ID Q8W1Y3
description Kinesin KP1 OS=Arabidopsis thaliana GN=KP1 PE=1 SV=2
trembl
ID B9RCC3
description Kinesin-like protein OS=Ricinus communis GN=RCOM_1686850 PE=3 SV=1
Gene Ontology
ID GO:0005871
description kinesin motor family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37402: 71326-71607 , PASA_asmbl_37403: 79522-79764
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003638_040 0.0 - - kinesin heavy chain, putative [Ricinus communis]
2 Hb_002986_140 0.1545166101 - - PREDICTED: uncharacterized protein LOC105639684 [Jatropha curcas]
3 Hb_002078_120 0.1554937977 - - PREDICTED: F-box/kelch-repeat protein At1g67480 [Jatropha curcas]
4 Hb_000028_150 0.1694731792 transcription factor TF Family: Tify PREDICTED: protein TIFY 6B isoform X1 [Jatropha curcas]
5 Hb_000483_270 0.175228177 - - PREDICTED: uncharacterized protein LOC105632352 [Jatropha curcas]
6 Hb_007002_050 0.1821732296 - - PREDICTED: uncharacterized protein LOC105642607 [Jatropha curcas]
7 Hb_002799_120 0.1834088779 - - PREDICTED: uncharacterized protein LOC105141197 [Populus euphratica]
8 Hb_000500_330 0.1834440545 - - PREDICTED: bidirectional sugar transporter SWEET2a-like [Jatropha curcas]
9 Hb_004846_230 0.1861964255 - - Chaperone protein dnaJ 8, chloroplast precursor, putative [Ricinus communis]
10 Hb_002540_060 0.1870080974 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH48 isoform X2 [Jatropha curcas]
11 Hb_002942_120 0.1870879744 transcription factor TF Family: bHLH Transcription factor ICE1, putative [Ricinus communis]
12 Hb_007336_050 0.1875904174 - - PREDICTED: uncharacterized protein LOC105630915 [Jatropha curcas]
13 Hb_002221_010 0.1907679177 - - PREDICTED: adenylyl-sulfate kinase 3-like [Jatropha curcas]
14 Hb_003397_030 0.1912294873 rubber biosynthesis Gene Name: Pyruvate dehydrogenase PREDICTED: pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic [Jatropha curcas]
15 Hb_000207_140 0.1932870567 - - hypothetical protein POPTR_0019s11310g [Populus trichocarpa]
16 Hb_006788_090 0.1968854682 - - -
17 Hb_038044_010 0.1972532488 - - 12-oxophytodienoate reductase 2 [Theobroma cacao]
18 Hb_029510_130 0.1989626516 - - PREDICTED: malonate--CoA ligase [Jatropha curcas]
19 Hb_002435_090 0.1993104803 - - PREDICTED: membrane-associated 30 kDa protein, chloroplastic [Jatropha curcas]
20 Hb_001478_020 0.2015386809 desease resistance Gene Name: AAA thyroid hormone receptor interactor, putative [Ricinus communis]

Gene co-expression network

sample Hb_003638_040 Hb_003638_040 Hb_002986_140 Hb_002986_140 Hb_003638_040--Hb_002986_140 Hb_002078_120 Hb_002078_120 Hb_003638_040--Hb_002078_120 Hb_000028_150 Hb_000028_150 Hb_003638_040--Hb_000028_150 Hb_000483_270 Hb_000483_270 Hb_003638_040--Hb_000483_270 Hb_007002_050 Hb_007002_050 Hb_003638_040--Hb_007002_050 Hb_002799_120 Hb_002799_120 Hb_003638_040--Hb_002799_120 Hb_002986_140--Hb_000028_150 Hb_002942_120 Hb_002942_120 Hb_002986_140--Hb_002942_120 Hb_001343_120 Hb_001343_120 Hb_002986_140--Hb_001343_120 Hb_003992_050 Hb_003992_050 Hb_002986_140--Hb_003992_050 Hb_000169_070 Hb_000169_070 Hb_002986_140--Hb_000169_070 Hb_002045_090 Hb_002045_090 Hb_002078_120--Hb_002045_090 Hb_003397_030 Hb_003397_030 Hb_002078_120--Hb_003397_030 Hb_000000_180 Hb_000000_180 Hb_002078_120--Hb_000000_180 Hb_001386_090 Hb_001386_090 Hb_002078_120--Hb_001386_090 Hb_029510_130 Hb_029510_130 Hb_002078_120--Hb_029510_130 Hb_002078_120--Hb_000483_270 Hb_002540_060 Hb_002540_060 Hb_000028_150--Hb_002540_060 Hb_000028_150--Hb_001343_120 Hb_002435_090 Hb_002435_090 Hb_000028_150--Hb_002435_090 Hb_001442_050 Hb_001442_050 Hb_000028_150--Hb_001442_050 Hb_000500_330 Hb_000500_330 Hb_000028_150--Hb_000500_330 Hb_007317_100 Hb_007317_100 Hb_000483_270--Hb_007317_100 Hb_002843_130 Hb_002843_130 Hb_000483_270--Hb_002843_130 Hb_000123_360 Hb_000123_360 Hb_000483_270--Hb_000123_360 Hb_000961_060 Hb_000961_060 Hb_000483_270--Hb_000961_060 Hb_000483_270--Hb_000500_330 Hb_005162_120 Hb_005162_120 Hb_007002_050--Hb_005162_120 Hb_002221_010 Hb_002221_010 Hb_007002_050--Hb_002221_010 Hb_002007_040 Hb_002007_040 Hb_007002_050--Hb_002007_040 Hb_000028_250 Hb_000028_250 Hb_007002_050--Hb_000028_250 Hb_011360_130 Hb_011360_130 Hb_007002_050--Hb_011360_130 Hb_002799_120--Hb_007317_100 Hb_006649_100 Hb_006649_100 Hb_002799_120--Hb_006649_100 Hb_000264_160 Hb_000264_160 Hb_002799_120--Hb_000264_160 Hb_000347_170 Hb_000347_170 Hb_002799_120--Hb_000347_170 Hb_005375_100 Hb_005375_100 Hb_002799_120--Hb_005375_100 Hb_000574_380 Hb_000574_380 Hb_002799_120--Hb_000574_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.652448 0.468015 16.9478 2.41051 0.118012 0.101066
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.04235 0.310105 1.28459 0.559051 3.89276

CAGE analysis