Hb_003640_060

Information

Type -
Description -
Location Contig3640: 42954-49624
Sequence    

Annotation

kegg
ID rcu:RCOM_1437250
description transferase, transferring glycosyl groups, putative (EC:2.4.1.173)
nr
ID XP_002512608.1
description transferase, transferring glycosyl groups, putative [Ricinus communis]
swissprot
ID Q9M8Z7
description Sterol 3-beta-glucosyltransferase UGT80A2 OS=Arabidopsis thaliana GN=UGT80A2 PE=1 SV=1
trembl
ID B9RFT9
description Transferase, transferring glycosyl groups, putative OS=Ricinus communis GN=RCOM_1437250 PE=4 SV=1
Gene Ontology
ID GO:0005886
description sterol 3-beta-glucosyltransferase ugt80a2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003640_060 0.0 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
2 Hb_003001_060 0.0803840479 - - wound-responsive family protein [Populus trichocarpa]
3 Hb_070986_010 0.0884838294 - - PREDICTED: macrophage erythroblast attacher [Jatropha curcas]
4 Hb_003878_190 0.0885775532 - - hypothetical protein POPTR_0011s11040g [Populus trichocarpa]
5 Hb_002893_060 0.0947242812 transcription factor TF Family: GNAT PREDICTED: N-alpha-acetyltransferase 50 [Jatropha curcas]
6 Hb_011805_080 0.1017935813 - - PREDICTED: uncharacterized protein LOC100242357 [Vitis vinifera]
7 Hb_003058_070 0.1076059365 - - PREDICTED: uncharacterized protein LOC105628964 [Jatropha curcas]
8 Hb_001824_070 0.1095724422 - - H/ACA ribonucleoprotein complex subunit, putative [Ricinus communis]
9 Hb_002107_130 0.110702609 - - protein with unknown function [Ricinus communis]
10 Hb_001818_020 0.111852084 - - PREDICTED: 60S ribosomal protein L21-1 [Phoenix dactylifera]
11 Hb_000154_080 0.1128133566 transcription factor TF Family: bZIP PREDICTED: probable transcription factor PosF21 [Jatropha curcas]
12 Hb_000798_030 0.1149655574 - - PREDICTED: uncharacterized protein LOC105635919 [Jatropha curcas]
13 Hb_000454_050 0.1154431041 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Vitis vinifera]
14 Hb_000417_110 0.1155175733 - - PREDICTED: uncharacterized protein LOC105649681 [Jatropha curcas]
15 Hb_000494_020 0.1162008942 - - PREDICTED: actin-related protein 2/3 complex subunit 5A [Jatropha curcas]
16 Hb_000928_240 0.1166134575 - - PREDICTED: uncharacterized protein LOC105632515 [Jatropha curcas]
17 Hb_000098_190 0.1171826084 - - PREDICTED: uncharacterized protein LOC105633343 [Jatropha curcas]
18 Hb_000933_180 0.1179292596 - - PREDICTED: chorismate mutase 3, chloroplastic [Jatropha curcas]
19 Hb_001246_090 0.1181622576 - - PREDICTED: acyl carrier protein 1, mitochondrial [Jatropha curcas]
20 Hb_001369_650 0.1201411314 - - PREDICTED: chloride conductance regulatory protein ICln [Jatropha curcas]

Gene co-expression network

sample Hb_003640_060 Hb_003640_060 Hb_003001_060 Hb_003001_060 Hb_003640_060--Hb_003001_060 Hb_070986_010 Hb_070986_010 Hb_003640_060--Hb_070986_010 Hb_003878_190 Hb_003878_190 Hb_003640_060--Hb_003878_190 Hb_002893_060 Hb_002893_060 Hb_003640_060--Hb_002893_060 Hb_011805_080 Hb_011805_080 Hb_003640_060--Hb_011805_080 Hb_003058_070 Hb_003058_070 Hb_003640_060--Hb_003058_070 Hb_003001_060--Hb_003878_190 Hb_003001_060--Hb_011805_080 Hb_003001_060--Hb_002893_060 Hb_001369_650 Hb_001369_650 Hb_003001_060--Hb_001369_650 Hb_003001_060--Hb_003058_070 Hb_000417_110 Hb_000417_110 Hb_003001_060--Hb_000417_110 Hb_004204_120 Hb_004204_120 Hb_070986_010--Hb_004204_120 Hb_001584_070 Hb_001584_070 Hb_070986_010--Hb_001584_070 Hb_002105_090 Hb_002105_090 Hb_070986_010--Hb_002105_090 Hb_000798_030 Hb_000798_030 Hb_070986_010--Hb_000798_030 Hb_010883_150 Hb_010883_150 Hb_070986_010--Hb_010883_150 Hb_001257_080 Hb_001257_080 Hb_070986_010--Hb_001257_080 Hb_001824_070 Hb_001824_070 Hb_003878_190--Hb_001824_070 Hb_000392_270 Hb_000392_270 Hb_003878_190--Hb_000392_270 Hb_000928_240 Hb_000928_240 Hb_003878_190--Hb_000928_240 Hb_009711_030 Hb_009711_030 Hb_003878_190--Hb_009711_030 Hb_000977_080 Hb_000977_080 Hb_003878_190--Hb_000977_080 Hb_000465_060 Hb_000465_060 Hb_002893_060--Hb_000465_060 Hb_000025_530 Hb_000025_530 Hb_002893_060--Hb_000025_530 Hb_023732_070 Hb_023732_070 Hb_002893_060--Hb_023732_070 Hb_002893_060--Hb_003878_190 Hb_002893_060--Hb_001824_070 Hb_007617_020 Hb_007617_020 Hb_011805_080--Hb_007617_020 Hb_011805_080--Hb_001369_650 Hb_011805_080--Hb_002893_060 Hb_007747_090 Hb_007747_090 Hb_011805_080--Hb_007747_090 Hb_011805_080--Hb_003878_190 Hb_003058_070--Hb_000417_110 Hb_002234_210 Hb_002234_210 Hb_003058_070--Hb_002234_210 Hb_000190_060 Hb_000190_060 Hb_003058_070--Hb_000190_060 Hb_000365_380 Hb_000365_380 Hb_003058_070--Hb_000365_380 Hb_003058_070--Hb_000798_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.37885 0.558354 0.953743 0.672439 2.63354 2.06808
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.4737 3.96373 0.896038 1.44215 0.249268

CAGE analysis