Hb_003665_060

Information

Type -
Description -
Location Contig3665: 97319-106820
Sequence    

Annotation

kegg
ID pop:POPTR_0017s03460g
description hypothetical protein
nr
ID XP_012079689.1
description PREDICTED: protein N-lysine methyltransferase METTL21A [Jatropha curcas]
swissprot
ID Q8WXB1
description Protein N-lysine methyltransferase METTL21A OS=Homo sapiens GN=METTL21A PE=1 SV=2
trembl
ID A0A067LM21
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17437 PE=4 SV=1
Gene Ontology
ID GO:0016746
description protein n-lysine methyltransferase mettl21a

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37704: 97323-106934 , PASA_asmbl_37705: 97418-106891
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003665_060 0.0 - - PREDICTED: protein N-lysine methyltransferase METTL21A [Jatropha curcas]
2 Hb_000010_330 0.0509873829 - - PREDICTED: probable Ufm1-specific protease [Jatropha curcas]
3 Hb_003964_070 0.0511126848 - - hypothetical protein JCGZ_15695 [Jatropha curcas]
4 Hb_007317_110 0.0513861744 - - PREDICTED: uncharacterized RNA-binding protein C660.15-like [Jatropha curcas]
5 Hb_000230_560 0.0528541986 - - PREDICTED: UPF0613 protein PB24D3.06c [Jatropha curcas]
6 Hb_003030_070 0.0557608532 - - PREDICTED: ELMO domain-containing protein A isoform X1 [Jatropha curcas]
7 Hb_000085_160 0.0610893879 - - hypothetical protein CICLE_v10009012mg [Citrus clementina]
8 Hb_003125_160 0.0617781066 transcription factor TF Family: NF-YC PREDICTED: nuclear transcription factor Y subunit C-1 isoform X1 [Jatropha curcas]
9 Hb_005357_080 0.0630163821 - - PREDICTED: tyrosyl-DNA phosphodiesterase 1 [Jatropha curcas]
10 Hb_007075_040 0.0639869079 - - hypothetical protein CISIN_1g039518mg, partial [Citrus sinensis]
11 Hb_010457_030 0.0668563145 - - APO protein 4, mitochondrial precursor, putative [Ricinus communis]
12 Hb_019280_040 0.0692155125 - - PREDICTED: pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Jatropha curcas]
13 Hb_156973_010 0.0697603851 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002716_130 0.0702009255 - - PREDICTED: uncharacterized protein LOC105645470 isoform X2 [Jatropha curcas]
15 Hb_007904_200 0.0704995789 - - protein binding protein, putative [Ricinus communis]
16 Hb_000120_670 0.0710100367 - - PREDICTED: SRSF protein kinase 2-like [Jatropha curcas]
17 Hb_003417_020 0.071854765 - - PREDICTED: 50S ribosomal protein L13, chloroplastic [Jatropha curcas]
18 Hb_000606_090 0.0727678596 - - Far upstream element-binding protein, putative [Ricinus communis]
19 Hb_003728_080 0.0737070872 transcription factor TF Family: FAR1 PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3-like [Jatropha curcas]
20 Hb_000618_040 0.0741796187 - - hypothetical protein CICLE_v10027942mg [Citrus clementina]

Gene co-expression network

sample Hb_003665_060 Hb_003665_060 Hb_000010_330 Hb_000010_330 Hb_003665_060--Hb_000010_330 Hb_003964_070 Hb_003964_070 Hb_003665_060--Hb_003964_070 Hb_007317_110 Hb_007317_110 Hb_003665_060--Hb_007317_110 Hb_000230_560 Hb_000230_560 Hb_003665_060--Hb_000230_560 Hb_003030_070 Hb_003030_070 Hb_003665_060--Hb_003030_070 Hb_000085_160 Hb_000085_160 Hb_003665_060--Hb_000085_160 Hb_007904_200 Hb_007904_200 Hb_000010_330--Hb_007904_200 Hb_010457_030 Hb_010457_030 Hb_000010_330--Hb_010457_030 Hb_019280_040 Hb_019280_040 Hb_000010_330--Hb_019280_040 Hb_002200_080 Hb_002200_080 Hb_000010_330--Hb_002200_080 Hb_048937_040 Hb_048937_040 Hb_000010_330--Hb_048937_040 Hb_003964_070--Hb_007317_110 Hb_000120_670 Hb_000120_670 Hb_003964_070--Hb_000120_670 Hb_001357_350 Hb_001357_350 Hb_003964_070--Hb_001357_350 Hb_000345_240 Hb_000345_240 Hb_003964_070--Hb_000345_240 Hb_010381_090 Hb_010381_090 Hb_003964_070--Hb_010381_090 Hb_006827_020 Hb_006827_020 Hb_007317_110--Hb_006827_020 Hb_007317_110--Hb_000085_160 Hb_000808_270 Hb_000808_270 Hb_007317_110--Hb_000808_270 Hb_007059_010 Hb_007059_010 Hb_007317_110--Hb_007059_010 Hb_002997_080 Hb_002997_080 Hb_000230_560--Hb_002997_080 Hb_000141_250 Hb_000141_250 Hb_000230_560--Hb_000141_250 Hb_000230_560--Hb_003030_070 Hb_007075_040 Hb_007075_040 Hb_000230_560--Hb_007075_040 Hb_000883_020 Hb_000883_020 Hb_000230_560--Hb_000883_020 Hb_001369_180 Hb_001369_180 Hb_003030_070--Hb_001369_180 Hb_002495_040 Hb_002495_040 Hb_003030_070--Hb_002495_040 Hb_003030_070--Hb_007317_110 Hb_002391_300 Hb_002391_300 Hb_003030_070--Hb_002391_300 Hb_003525_010 Hb_003525_010 Hb_000085_160--Hb_003525_010 Hb_000011_200 Hb_000011_200 Hb_000085_160--Hb_000011_200 Hb_000630_050 Hb_000630_050 Hb_000085_160--Hb_000630_050 Hb_000085_160--Hb_000010_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.4892 9.23472 13.0491 16.3374 19.3928 25.9112
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.4241 19.0861 15.5923 13.2202 11.7275

CAGE analysis