Hb_003666_020

Information

Type -
Description -
Location Contig3666: 55324-60114
Sequence    

Annotation

kegg
ID rcu:RCOM_0603670
description kinase, putative (EC:1.3.1.74)
nr
ID XP_002522378.1
description kinase, putative [Ricinus communis]
swissprot
ID Q8RY67
description Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2
trembl
ID B9S8Q9
description Kinase, putative OS=Ricinus communis GN=RCOM_0603670 PE=3 SV=1
Gene Ontology
ID GO:0004674
description wall-associated receptor kinase-like 14

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37706: 55470-59099 , PASA_asmbl_37707: 59774-60103
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003666_020 0.0 - - kinase, putative [Ricinus communis]
2 Hb_004553_030 0.0716543561 - - PREDICTED: uncharacterized protein LOC105629320 [Jatropha curcas]
3 Hb_000928_220 0.0738740381 - - PREDICTED: protein SCAI [Jatropha curcas]
4 Hb_000402_080 0.0810659015 - - PREDICTED: pentatricopeptide repeat-containing protein At1g60770 [Jatropha curcas]
5 Hb_001258_020 0.0813943665 - - PREDICTED: protein RMD5 homolog A [Jatropha curcas]
6 Hb_008103_060 0.0863983197 - - PREDICTED: glycylpeptide N-tetradecanoyltransferase 1 [Jatropha curcas]
7 Hb_001205_200 0.0871139821 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000358_230 0.0886295969 - - protein phosphatases pp1 regulatory subunit, putative [Ricinus communis]
9 Hb_000705_170 0.0891205155 - - PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Jatropha curcas]
10 Hb_000260_180 0.0918862574 - - PREDICTED: KH domain-containing protein At2g38610 [Jatropha curcas]
11 Hb_000087_060 0.0931290258 - - protein transporter, putative [Ricinus communis]
12 Hb_004916_020 0.0934568879 - - PREDICTED: DNA ligase 4 [Jatropha curcas]
13 Hb_002876_130 0.0936422043 - - PREDICTED: uncharacterized protein LOC105637143 [Jatropha curcas]
14 Hb_000120_170 0.0946614903 - - selenoprotein [Populus trichocarpa]
15 Hb_000809_170 0.0951419104 - - PREDICTED: guanine nucleotide-binding protein subunit beta-like protein 1 homolog isoform X1 [Jatropha curcas]
16 Hb_000076_160 0.0958267061 - - PREDICTED: AP-5 complex subunit zeta-1 [Jatropha curcas]
17 Hb_000402_230 0.0960416575 - - PREDICTED: sorting nexin 2A-like isoform X1 [Jatropha curcas]
18 Hb_005306_160 0.0966162842 - - PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like [Jatropha curcas]
19 Hb_001104_160 0.0970886475 - - PREDICTED: serine/threonine-protein kinase CTR1 [Jatropha curcas]
20 Hb_004195_200 0.0973040907 - - glycosyl transferase family 1 family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_003666_020 Hb_003666_020 Hb_004553_030 Hb_004553_030 Hb_003666_020--Hb_004553_030 Hb_000928_220 Hb_000928_220 Hb_003666_020--Hb_000928_220 Hb_000402_080 Hb_000402_080 Hb_003666_020--Hb_000402_080 Hb_001258_020 Hb_001258_020 Hb_003666_020--Hb_001258_020 Hb_008103_060 Hb_008103_060 Hb_003666_020--Hb_008103_060 Hb_001205_200 Hb_001205_200 Hb_003666_020--Hb_001205_200 Hb_001195_530 Hb_001195_530 Hb_004553_030--Hb_001195_530 Hb_000809_170 Hb_000809_170 Hb_004553_030--Hb_000809_170 Hb_000402_230 Hb_000402_230 Hb_004553_030--Hb_000402_230 Hb_004553_030--Hb_001258_020 Hb_002217_170 Hb_002217_170 Hb_004553_030--Hb_002217_170 Hb_000928_220--Hb_000402_080 Hb_002876_130 Hb_002876_130 Hb_000928_220--Hb_002876_130 Hb_000076_160 Hb_000076_160 Hb_000928_220--Hb_000076_160 Hb_002078_110 Hb_002078_110 Hb_000928_220--Hb_002078_110 Hb_002835_230 Hb_002835_230 Hb_000928_220--Hb_002835_230 Hb_002046_110 Hb_002046_110 Hb_000928_220--Hb_002046_110 Hb_000402_080--Hb_000076_160 Hb_001104_160 Hb_001104_160 Hb_000402_080--Hb_001104_160 Hb_008453_140 Hb_008453_140 Hb_000402_080--Hb_008453_140 Hb_000402_080--Hb_002876_130 Hb_000696_230 Hb_000696_230 Hb_000402_080--Hb_000696_230 Hb_005288_170 Hb_005288_170 Hb_001258_020--Hb_005288_170 Hb_001054_030 Hb_001054_030 Hb_001258_020--Hb_001054_030 Hb_000260_180 Hb_000260_180 Hb_001258_020--Hb_000260_180 Hb_000260_640 Hb_000260_640 Hb_001258_020--Hb_000260_640 Hb_000070_080 Hb_000070_080 Hb_008103_060--Hb_000070_080 Hb_140049_040 Hb_140049_040 Hb_008103_060--Hb_140049_040 Hb_007635_030 Hb_007635_030 Hb_008103_060--Hb_007635_030 Hb_004195_200 Hb_004195_200 Hb_008103_060--Hb_004195_200 Hb_008103_060--Hb_002876_130 Hb_002043_140 Hb_002043_140 Hb_008103_060--Hb_002043_140 Hb_000087_060 Hb_000087_060 Hb_001205_200--Hb_000087_060 Hb_004143_100 Hb_004143_100 Hb_001205_200--Hb_004143_100 Hb_001205_200--Hb_000076_160 Hb_001205_200--Hb_000402_230 Hb_000358_230 Hb_000358_230 Hb_001205_200--Hb_000358_230 Hb_003866_080 Hb_003866_080 Hb_001205_200--Hb_003866_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.41458 10.7502 6.05412 7.2094 9.57454 4.54502
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.4743 5.86808 4.4087 5.52871 3.36817

CAGE analysis