Hb_003683_130

Information

Type -
Description -
Location Contig3683: 163925-167556
Sequence    

Annotation

kegg
ID rcu:RCOM_1618820
description enolase, putative (EC:4.2.1.11)
nr
ID XP_012092922.1
description PREDICTED: enolase 1, chloroplastic [Jatropha curcas]
swissprot
ID Q9C9C4
description Enolase 1, chloroplastic OS=Arabidopsis thaliana GN=ENO1 PE=1 SV=1
trembl
ID E6NU46
description JHL10I11.2 protein OS=Jatropha curcas GN=JHL10I11.2 PE=3 SV=1
Gene Ontology
ID GO:0000015
description enolase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37886: 163984-167749 , PASA_asmbl_37887: 159764-167749 , PASA_asmbl_37888: 166764-167068
cDNA
(Sanger)
(ID:Location)		 001_K14.ab1: 166228-167749 , 023_D14.ab1: 167547-167749

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003683_130 0.0 - - PREDICTED: enolase 1, chloroplastic [Jatropha curcas]
2 Hb_000260_400 0.0776591368 - - PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Jatropha curcas]
3 Hb_001616_070 0.0827155608 - - PREDICTED: uncharacterized protein LOC105644365 [Jatropha curcas]
4 Hb_000365_200 0.0865931344 - - PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Jatropha curcas]
5 Hb_004297_090 0.0929643397 - - PREDICTED: DNA polymerase epsilon catalytic subunit A [Jatropha curcas]
6 Hb_022092_010 0.1006811254 - - PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like [Jatropha curcas]
7 Hb_000009_060 0.1095237519 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Jatropha curcas]
8 Hb_000220_110 0.1104841069 - - fructose-bisphosphate aldolase, putative [Ricinus communis]
9 Hb_000590_070 0.1156574988 - - PREDICTED: beta-hexosaminidase 1 [Jatropha curcas]
10 Hb_132101_010 0.1157493338 - - hypothetical protein B456_007G078100 [Gossypium raimondii]
11 Hb_002317_010 0.1167663188 - - PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Jatropha curcas]
12 Hb_031527_080 0.11721287 - - utp-glucose-1-phosphate uridylyltransferase, putative [Ricinus communis]
13 Hb_001677_100 0.117237626 - - delta1-pyrroline-5-carboxylate synthase [Manihot esculenta]
14 Hb_004218_130 0.1178403356 - - PREDICTED: uridine 5'-monophosphate synthase [Jatropha curcas]
15 Hb_005741_040 0.1187873381 - - PREDICTED: probable receptor-like protein kinase At1g49730 [Jatropha curcas]
16 Hb_011214_110 0.1193133797 - - PREDICTED: ALA-interacting subunit 3-like [Jatropha curcas]
17 Hb_000683_050 0.1193353786 - - PREDICTED: probable carbohydrate esterase At4g34215 [Jatropha curcas]
18 Hb_000494_030 0.1195796024 - - PREDICTED: uncharacterized protein LOC105643196 [Jatropha curcas]
19 Hb_013358_050 0.1222573672 - - NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, putative [Ricinus communis]
20 Hb_001545_130 0.1229275923 - - sur2 hydroxylase/desaturase, putative [Ricinus communis]

Gene co-expression network

sample Hb_003683_130 Hb_003683_130 Hb_000260_400 Hb_000260_400 Hb_003683_130--Hb_000260_400 Hb_001616_070 Hb_001616_070 Hb_003683_130--Hb_001616_070 Hb_000365_200 Hb_000365_200 Hb_003683_130--Hb_000365_200 Hb_004297_090 Hb_004297_090 Hb_003683_130--Hb_004297_090 Hb_022092_010 Hb_022092_010 Hb_003683_130--Hb_022092_010 Hb_000009_060 Hb_000009_060 Hb_003683_130--Hb_000009_060 Hb_005741_040 Hb_005741_040 Hb_000260_400--Hb_005741_040 Hb_002687_180 Hb_002687_180 Hb_000260_400--Hb_002687_180 Hb_002317_010 Hb_002317_010 Hb_000260_400--Hb_002317_010 Hb_000260_400--Hb_001616_070 Hb_002687_200 Hb_002687_200 Hb_000260_400--Hb_002687_200 Hb_001616_070--Hb_000009_060 Hb_000703_330 Hb_000703_330 Hb_001616_070--Hb_000703_330 Hb_000220_110 Hb_000220_110 Hb_001616_070--Hb_000220_110 Hb_000197_190 Hb_000197_190 Hb_001616_070--Hb_000197_190 Hb_007416_070 Hb_007416_070 Hb_001616_070--Hb_007416_070 Hb_000365_200--Hb_004297_090 Hb_000365_200--Hb_000260_400 Hb_000365_200--Hb_022092_010 Hb_001677_100 Hb_001677_100 Hb_000365_200--Hb_001677_100 Hb_006816_230 Hb_006816_230 Hb_000365_200--Hb_006816_230 Hb_004297_090--Hb_001677_100 Hb_004297_090--Hb_000260_400 Hb_004883_020 Hb_004883_020 Hb_004297_090--Hb_004883_020 Hb_009296_020 Hb_009296_020 Hb_004297_090--Hb_009296_020 Hb_001689_040 Hb_001689_040 Hb_022092_010--Hb_001689_040 Hb_002392_020 Hb_002392_020 Hb_022092_010--Hb_002392_020 Hb_013358_050 Hb_013358_050 Hb_022092_010--Hb_013358_050 Hb_132101_010 Hb_132101_010 Hb_022092_010--Hb_132101_010 Hb_002284_100 Hb_002284_100 Hb_022092_010--Hb_002284_100 Hb_001021_010 Hb_001021_010 Hb_000009_060--Hb_001021_010 Hb_000009_060--Hb_000703_330 Hb_018845_010 Hb_018845_010 Hb_000009_060--Hb_018845_010 Hb_000009_060--Hb_007416_070 Hb_000389_030 Hb_000389_030 Hb_000009_060--Hb_000389_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.66232 12.8053 28.4274 38.4633 6.08691 6.71463
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.48226 3.40843 10.7687 35.1879 18.7655

CAGE analysis