Hb_003711_050

Information

Type -
Description -
Location Contig3711: 85127-87771
Sequence    

Annotation

kegg
ID rcu:RCOM_1266620
description Isoflavone reductase, putative (EC:1.3.1.45)
nr
ID XP_002530547.1
description Isoflavone reductase, putative [Ricinus communis]
swissprot
ID Q15GI3
description Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1
trembl
ID B9SX28
description Isoflavone reductase, putative OS=Ricinus communis GN=RCOM_1266620 PE=4 SV=1
Gene Ontology
ID GO:0047526
description isoeugenol synthase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38058: 85149-87102 , PASA_asmbl_38059: 87369-87795
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003711_050 0.0 - - Isoflavone reductase, putative [Ricinus communis]
2 Hb_021443_010 0.0487909812 - - PREDICTED: cleavage and polyadenylation specificity factor subunit 1 [Jatropha curcas]
3 Hb_032260_040 0.06963303 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000438_180 0.0746863407 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
5 Hb_000201_050 0.0825007701 - - -
6 Hb_001584_250 0.0942055276 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
7 Hb_000853_140 0.0960629985 - - hypothetical protein POPTR_0014s12080g [Populus trichocarpa]
8 Hb_001401_110 0.0977236807 - - hypothetical protein JCGZ_04272 [Jatropha curcas]
9 Hb_027746_030 0.099366569 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000422_060 0.1045860068 transcription factor TF Family: OFP hypothetical protein RCOM_1282480 [Ricinus communis]
11 Hb_012217_010 0.1070214113 - - PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9 [Jatropha curcas]
12 Hb_007441_100 0.1080886912 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 12 [Populus euphratica]
13 Hb_032299_020 0.1082003514 - - tonoplast intrinsic protein, putative [Ricinus communis]
14 Hb_000349_280 0.1090470609 - - conserved hypothetical protein [Ricinus communis]
15 Hb_007545_220 0.1149769348 - - PREDICTED: uncharacterized protein LOC105632565 [Jatropha curcas]
16 Hb_001269_430 0.1168687288 - - hypothetical protein JCGZ_04286 [Jatropha curcas]
17 Hb_002186_170 0.1173561086 - - hypothetical protein POPTR_0067s00200g [Populus trichocarpa]
18 Hb_000953_110 0.1173648311 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105629453 [Jatropha curcas]
19 Hb_008406_170 0.1180953487 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_000227_350 0.1217095226 - - hypothetical protein CICLE_v10006537mg [Citrus clementina]

Gene co-expression network

sample Hb_003711_050 Hb_003711_050 Hb_021443_010 Hb_021443_010 Hb_003711_050--Hb_021443_010 Hb_032260_040 Hb_032260_040 Hb_003711_050--Hb_032260_040 Hb_000438_180 Hb_000438_180 Hb_003711_050--Hb_000438_180 Hb_000201_050 Hb_000201_050 Hb_003711_050--Hb_000201_050 Hb_001584_250 Hb_001584_250 Hb_003711_050--Hb_001584_250 Hb_000853_140 Hb_000853_140 Hb_003711_050--Hb_000853_140 Hb_021443_010--Hb_000438_180 Hb_021443_010--Hb_032260_040 Hb_021443_010--Hb_001584_250 Hb_001401_110 Hb_001401_110 Hb_021443_010--Hb_001401_110 Hb_021443_010--Hb_000201_050 Hb_012217_010 Hb_012217_010 Hb_032260_040--Hb_012217_010 Hb_008406_170 Hb_008406_170 Hb_032260_040--Hb_008406_170 Hb_032260_040--Hb_000201_050 Hb_032260_040--Hb_000853_140 Hb_000438_180--Hb_001401_110 Hb_187906_010 Hb_187906_010 Hb_000438_180--Hb_187906_010 Hb_001269_430 Hb_001269_430 Hb_000438_180--Hb_001269_430 Hb_000025_150 Hb_000025_150 Hb_000438_180--Hb_000025_150 Hb_000201_050--Hb_001584_250 Hb_001502_010 Hb_001502_010 Hb_000201_050--Hb_001502_010 Hb_027746_030 Hb_027746_030 Hb_000201_050--Hb_027746_030 Hb_000422_060 Hb_000422_060 Hb_000201_050--Hb_000422_060 Hb_032299_020 Hb_032299_020 Hb_001584_250--Hb_032299_020 Hb_000429_080 Hb_000429_080 Hb_001584_250--Hb_000429_080 Hb_001584_250--Hb_000438_180 Hb_009851_120 Hb_009851_120 Hb_001584_250--Hb_009851_120 Hb_000007_020 Hb_000007_020 Hb_001584_250--Hb_000007_020 Hb_000853_140--Hb_008406_170 Hb_000953_110 Hb_000953_110 Hb_000853_140--Hb_000953_110 Hb_004158_040 Hb_004158_040 Hb_000853_140--Hb_004158_040 Hb_007545_220 Hb_007545_220 Hb_000853_140--Hb_007545_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0461214 3.74081 0.691988 16.6863 0 0.0257718
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 2.2053

CAGE analysis