Hb_003750_110

Information

Type -
Description -
Location Contig3750: 80686-82200
Sequence    

Annotation

kegg
ID rcu:RCOM_0012620
description aldose-1-epimerase, putative (EC:5.1.3.3)
nr
ID XP_012077819.1
description PREDICTED: aldose 1-epimerase-like [Jatropha curcas]
swissprot
ID Q9GKX6
description Aldose 1-epimerase OS=Sus scrofa GN=GALM PE=2 SV=1
trembl
ID A0A067KAK7
description Aldose 1-epimerase OS=Jatropha curcas GN=JCGZ_13447 PE=3 SV=1
Gene Ontology
ID GO:0005829
description aldose 1-epimerase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38292: 80654-82350
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003750_110 0.0 - - PREDICTED: aldose 1-epimerase-like [Jatropha curcas]
2 Hb_000836_620 0.0541854165 - - PREDICTED: protochlorophyllide reductase, chloroplastic [Jatropha curcas]
3 Hb_005460_040 0.074803178 - - PREDICTED: long chain acyl-CoA synthetase 2 [Jatropha curcas]
4 Hb_001374_050 0.0754700953 - - PREDICTED: subtilisin-like protease SBT5.3 [Jatropha curcas]
5 Hb_000142_050 0.0759897573 - - PREDICTED: beta-glucosidase 18-like isoform X1 [Populus euphratica]
6 Hb_000080_070 0.0782488348 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic [Jatropha curcas]
7 Hb_002042_090 0.0827758375 - - PREDICTED: root phototropism protein 3-like [Jatropha curcas]
8 Hb_002929_030 0.0833482386 - - Serine/threonine-protein kinase-transforming protein raf, putative [Ricinus communis]
9 Hb_001942_060 0.0839002238 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004553_050 0.0841232325 - - PREDICTED: probable inactive receptor kinase At5g10020 [Jatropha curcas]
11 Hb_000821_030 0.0849219033 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN-2 [Jatropha curcas]
12 Hb_001233_050 0.0875504499 - - Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplast precursor, putative [Ricinus communis]
13 Hb_001205_140 0.089853692 - - PREDICTED: cytochrome P450 90B1 [Jatropha curcas]
14 Hb_002245_050 0.0908539931 - - Oxygen-evolving enhancer protein 3-1, chloroplast precursor, putative [Ricinus communis]
15 Hb_000018_110 0.0913335202 - - hypothetical protein POPTR_0018s00370g [Populus trichocarpa]
16 Hb_002284_290 0.0916584172 - - PREDICTED: transport and Golgi organization 2 homolog [Jatropha curcas]
17 Hb_145502_010 0.0918842901 transcription factor TF Family: MYB PREDICTED: transcription factor MYB82-like [Jatropha curcas]
18 Hb_001433_210 0.0919567793 - - PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
19 Hb_000174_120 0.0920512984 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
20 Hb_000210_210 0.0934294058 - - PREDICTED: uncharacterized protein LOC105635822 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_003750_110 Hb_003750_110 Hb_000836_620 Hb_000836_620 Hb_003750_110--Hb_000836_620 Hb_005460_040 Hb_005460_040 Hb_003750_110--Hb_005460_040 Hb_001374_050 Hb_001374_050 Hb_003750_110--Hb_001374_050 Hb_000142_050 Hb_000142_050 Hb_003750_110--Hb_000142_050 Hb_000080_070 Hb_000080_070 Hb_003750_110--Hb_000080_070 Hb_002042_090 Hb_002042_090 Hb_003750_110--Hb_002042_090 Hb_002929_030 Hb_002929_030 Hb_000836_620--Hb_002929_030 Hb_001433_210 Hb_001433_210 Hb_000836_620--Hb_001433_210 Hb_000635_240 Hb_000635_240 Hb_000836_620--Hb_000635_240 Hb_000210_210 Hb_000210_210 Hb_000836_620--Hb_000210_210 Hb_000836_620--Hb_000142_050 Hb_004553_050 Hb_004553_050 Hb_005460_040--Hb_004553_050 Hb_005460_040--Hb_001374_050 Hb_005460_040--Hb_002042_090 Hb_001300_190 Hb_001300_190 Hb_005460_040--Hb_001300_190 Hb_001789_220 Hb_001789_220 Hb_005460_040--Hb_001789_220 Hb_001166_010 Hb_001166_010 Hb_005460_040--Hb_001166_010 Hb_001374_050--Hb_004553_050 Hb_001374_050--Hb_001300_190 Hb_001374_050--Hb_000836_620 Hb_001205_140 Hb_001205_140 Hb_001374_050--Hb_001205_140 Hb_000018_110 Hb_000018_110 Hb_000142_050--Hb_000018_110 Hb_145502_010 Hb_145502_010 Hb_000142_050--Hb_145502_010 Hb_002245_050 Hb_002245_050 Hb_000142_050--Hb_002245_050 Hb_009692_050 Hb_009692_050 Hb_000142_050--Hb_009692_050 Hb_000174_120 Hb_000174_120 Hb_000142_050--Hb_000174_120 Hb_000142_050--Hb_001433_210 Hb_001287_020 Hb_001287_020 Hb_000080_070--Hb_001287_020 Hb_000080_070--Hb_000836_620 Hb_001638_060 Hb_001638_060 Hb_000080_070--Hb_001638_060 Hb_000080_070--Hb_000142_050 Hb_003683_170 Hb_003683_170 Hb_000080_070--Hb_003683_170 Hb_009476_030 Hb_009476_030 Hb_002042_090--Hb_009476_030 Hb_002042_090--Hb_001789_220 Hb_002042_090--Hb_001205_140 Hb_007853_030 Hb_007853_030 Hb_002042_090--Hb_007853_030 Hb_005345_020 Hb_005345_020 Hb_002042_090--Hb_005345_020 Hb_000210_030 Hb_000210_030 Hb_002042_090--Hb_000210_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0268951 0.100572 25.6828 5.68619 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.147795 0.0387475 0 0.498359 17.07

CAGE analysis