Hb_003777_120

Information

Type -
Description -
Location Contig3777: 191344-203134
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa022052mg
description hypothetical protein
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38438: 187807-191011
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003777_120 0.0 - - -
2 Hb_074966_010 0.0678235402 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
3 Hb_001926_020 0.0717675972 - - PREDICTED: glutamate receptor 2.9-like [Jatropha curcas]
4 Hb_032731_010 0.0796062349 - - RING-H2 finger protein ATL5M precursor, putative [Ricinus communis]
5 Hb_059318_010 0.0805018696 - - glutamate receptor 2 plant, putative [Ricinus communis]
6 Hb_000199_040 0.0811619524 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
7 Hb_000002_370 0.0903033482 - - PREDICTED: uncharacterized protein LOC105632103 [Jatropha curcas]
8 Hb_111997_010 0.0926826541 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Vitis vinifera]
9 Hb_004567_070 0.0948183871 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002053_180 0.0952656511 - - PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
11 Hb_001606_010 0.1008951632 - - kinase, putative [Ricinus communis]
12 Hb_005486_020 0.101054644 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT5 [Jatropha curcas]
13 Hb_001926_070 0.1120628659 - - hypothetical protein JCGZ_21510 [Jatropha curcas]
14 Hb_006789_030 0.1125410936 - - PREDICTED: wall-associated receptor kinase-like 22 [Prunus mume]
15 Hb_005888_050 0.1159235995 - - ATP binding protein, putative [Ricinus communis]
16 Hb_008019_010 0.1165714184 - - PREDICTED: nitrile-specifier protein 5-like [Jatropha curcas]
17 Hb_006188_020 0.1176377176 - - PREDICTED: uncharacterized protein LOC105646403 [Jatropha curcas]
18 Hb_003531_050 0.1182718222 - - PREDICTED: pyridoxal reductase, chloroplastic [Jatropha curcas]
19 Hb_001352_030 0.1201096337 - - PREDICTED: uncharacterized protein LOC105636310 [Jatropha curcas]
20 Hb_004040_010 0.1205629889 - - hypothetical protein POPTR_0019s14250g [Populus trichocarpa]

Gene co-expression network

sample Hb_003777_120 Hb_003777_120 Hb_074966_010 Hb_074966_010 Hb_003777_120--Hb_074966_010 Hb_001926_020 Hb_001926_020 Hb_003777_120--Hb_001926_020 Hb_032731_010 Hb_032731_010 Hb_003777_120--Hb_032731_010 Hb_059318_010 Hb_059318_010 Hb_003777_120--Hb_059318_010 Hb_000199_040 Hb_000199_040 Hb_003777_120--Hb_000199_040 Hb_000002_370 Hb_000002_370 Hb_003777_120--Hb_000002_370 Hb_074966_010--Hb_001926_020 Hb_074966_010--Hb_059318_010 Hb_111997_010 Hb_111997_010 Hb_074966_010--Hb_111997_010 Hb_074966_010--Hb_032731_010 Hb_005888_050 Hb_005888_050 Hb_074966_010--Hb_005888_050 Hb_001926_020--Hb_059318_010 Hb_001926_020--Hb_032731_010 Hb_001926_020--Hb_005888_050 Hb_006188_020 Hb_006188_020 Hb_001926_020--Hb_006188_020 Hb_032731_010--Hb_059318_010 Hb_001926_070 Hb_001926_070 Hb_032731_010--Hb_001926_070 Hb_001606_010 Hb_001606_010 Hb_032731_010--Hb_001606_010 Hb_008019_010 Hb_008019_010 Hb_059318_010--Hb_008019_010 Hb_000049_030 Hb_000049_030 Hb_059318_010--Hb_000049_030 Hb_002053_180 Hb_002053_180 Hb_000199_040--Hb_002053_180 Hb_000199_040--Hb_000002_370 Hb_006922_020 Hb_006922_020 Hb_000199_040--Hb_006922_020 Hb_000878_090 Hb_000878_090 Hb_000199_040--Hb_000878_090 Hb_002490_060 Hb_002490_060 Hb_000199_040--Hb_002490_060 Hb_000103_370 Hb_000103_370 Hb_000002_370--Hb_000103_370 Hb_000002_370--Hb_002053_180 Hb_000836_090 Hb_000836_090 Hb_000002_370--Hb_000836_090 Hb_004567_070 Hb_004567_070 Hb_000002_370--Hb_004567_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.065436 0.203834 0.0746966 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0157484 0.0802199

CAGE analysis