Hb_003786_010

Information

Type transcription factor
Description TF Family: HB
Location Contig3786: 26963-34323
Sequence    

Annotation

kegg
ID pop:POPTR_0007s12170g
description POPTRDRAFT_218986; hypothetical protein
nr
ID XP_012079111.1
description PREDICTED: BEL1-like homeodomain protein 2 isoform X2 [Jatropha curcas]
swissprot
ID Q9SW80
description BEL1-like homeodomain protein 2 OS=Arabidopsis thaliana GN=BLH2 PE=1 SV=3
trembl
ID A0A067KJ17
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12285 PE=4 SV=1
Gene Ontology
ID GO:0003677
description bel1-like homeodomain protein 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38512: 27444-34473 , PASA_asmbl_38513: 31009-31461 , PASA_asmbl_38515: 27444-34473
cDNA
(Sanger)
(ID:Location)		 030_D19.ab1: 31009-31461

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003786_010 0.0 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 2 isoform X2 [Jatropha curcas]
2 Hb_011472_050 0.1311300575 - - -
3 Hb_005542_010 0.1474156223 - - Uncharacterized protein TCM_021447 [Theobroma cacao]
4 Hb_010565_030 0.1492384375 - - hypothetical protein VITISV_006810 [Vitis vinifera]
5 Hb_006277_080 0.152047853 - - PREDICTED: uncharacterized protein LOC105649701 [Jatropha curcas]
6 Hb_025045_010 0.153414848 - - catalytic, putative [Ricinus communis]
7 Hb_000574_320 0.1545974403 - - hypothetical protein CICLE_v10024937mg [Citrus clementina]
8 Hb_000215_230 0.1547921566 - - PREDICTED: uncharacterized protein LOC105637821 [Jatropha curcas]
9 Hb_008494_090 0.1583293114 - - PREDICTED: uncharacterized protein LOC105636007 [Jatropha curcas]
10 Hb_000853_050 0.1583314299 - - PREDICTED: putative GTP diphosphokinase RSH1, chloroplastic isoform X1 [Jatropha curcas]
11 Hb_140389_010 0.1611057832 - - Ran GTPase binding protein, putative [Ricinus communis]
12 Hb_001195_250 0.1614513003 - - lrr receptor protein kinase, putative [Ricinus communis]
13 Hb_003517_090 0.1637897067 - - PREDICTED: zinc finger CCCH domain-containing protein 18-like isoform X2 [Jatropha curcas]
14 Hb_000365_220 0.167421928 - - protein phosphatase-1, putative [Ricinus communis]
15 Hb_003007_030 0.168795408 - - -
16 Hb_001514_150 0.169388356 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
17 Hb_000084_140 0.1700024954 - - Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
18 Hb_083242_020 0.1700771008 - - hypothetical protein JCGZ_20097 [Jatropha curcas]
19 Hb_001497_040 0.172821491 - - hypothetical protein POPTR_0008s219701g, partial [Populus trichocarpa]
20 Hb_000173_110 0.1737246584 - - putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus domestica]

Gene co-expression network

sample Hb_003786_010 Hb_003786_010 Hb_011472_050 Hb_011472_050 Hb_003786_010--Hb_011472_050 Hb_005542_010 Hb_005542_010 Hb_003786_010--Hb_005542_010 Hb_010565_030 Hb_010565_030 Hb_003786_010--Hb_010565_030 Hb_006277_080 Hb_006277_080 Hb_003786_010--Hb_006277_080 Hb_025045_010 Hb_025045_010 Hb_003786_010--Hb_025045_010 Hb_000574_320 Hb_000574_320 Hb_003786_010--Hb_000574_320 Hb_011472_050--Hb_010565_030 Hb_011472_050--Hb_005542_010 Hb_067472_010 Hb_067472_010 Hb_011472_050--Hb_067472_010 Hb_001366_260 Hb_001366_260 Hb_011472_050--Hb_001366_260 Hb_000173_110 Hb_000173_110 Hb_011472_050--Hb_000173_110 Hb_009434_060 Hb_009434_060 Hb_011472_050--Hb_009434_060 Hb_005542_010--Hb_010565_030 Hb_002110_110 Hb_002110_110 Hb_005542_010--Hb_002110_110 Hb_011609_210 Hb_011609_210 Hb_005542_010--Hb_011609_210 Hb_005542_010--Hb_000173_110 Hb_005542_010--Hb_009434_060 Hb_010565_030--Hb_000173_110 Hb_010565_030--Hb_011609_210 Hb_000123_340 Hb_000123_340 Hb_010565_030--Hb_000123_340 Hb_010565_030--Hb_002110_110 Hb_000853_050 Hb_000853_050 Hb_006277_080--Hb_000853_050 Hb_140389_010 Hb_140389_010 Hb_006277_080--Hb_140389_010 Hb_000926_070 Hb_000926_070 Hb_006277_080--Hb_000926_070 Hb_002276_030 Hb_002276_030 Hb_006277_080--Hb_002276_030 Hb_003602_030 Hb_003602_030 Hb_006277_080--Hb_003602_030 Hb_003141_060 Hb_003141_060 Hb_006277_080--Hb_003141_060 Hb_001821_060 Hb_001821_060 Hb_025045_010--Hb_001821_060 Hb_013968_010 Hb_013968_010 Hb_025045_010--Hb_013968_010 Hb_002026_030 Hb_002026_030 Hb_025045_010--Hb_002026_030 Hb_003912_080 Hb_003912_080 Hb_025045_010--Hb_003912_080 Hb_007765_130 Hb_007765_130 Hb_025045_010--Hb_007765_130 Hb_002888_040 Hb_002888_040 Hb_025045_010--Hb_002888_040 Hb_000574_320--Hb_140389_010 Hb_000069_500 Hb_000069_500 Hb_000574_320--Hb_000069_500 Hb_000574_320--Hb_011472_050 Hb_000574_320--Hb_006277_080 Hb_000556_070 Hb_000556_070 Hb_000574_320--Hb_000556_070 Hb_002030_050 Hb_002030_050 Hb_000574_320--Hb_002030_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.92903 15.5723 11.7774 7.69479 0.397413 1.04925
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.28236 0.271678 0.271653 7.27109 34.3965

CAGE analysis