Hb_003793_050

Information

Type -
Description -
Location Contig3793: 21367-21714
Sequence    

Annotation

kegg
ID egr:104456016
description uncharacterized LOC104456016
nr
ID XP_012066508.1
description PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L2Z2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23702 PE=4 SV=1
Gene Ontology
ID GO:0006979
description plant t22k18-16

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003793_050 0.0 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
2 Hb_007943_010 0.1062262304 - - -
3 Hb_023528_010 0.137266952 - - hypothetical protein POPTR_0013s01580g [Populus trichocarpa]
4 Hb_092043_020 0.1686072388 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
5 Hb_004529_020 0.1739968415 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
6 Hb_003392_010 0.1904614911 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
7 Hb_049827_010 0.1934866804 - - PREDICTED: uncharacterized protein LOC105762110 [Gossypium raimondii]
8 Hb_010555_020 0.1966723737 - - hypothetical protein JCGZ_06771 [Jatropha curcas]
9 Hb_006387_010 0.1970384781 - - PREDICTED: uncharacterized protein LOC105649124 [Jatropha curcas]
10 Hb_001863_210 0.2054372679 - - -
11 Hb_185830_100 0.2069207362 - - -
12 Hb_002708_010 0.2085644671 - - -
13 Hb_125948_020 0.2116047857 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
14 Hb_102355_010 0.2290963684 - - PREDICTED: uncharacterized protein LOC104094591, partial [Nicotiana tomentosiformis]
15 Hb_000060_110 0.2292820919 - - PREDICTED: uncharacterized protein LOC105649714 [Jatropha curcas]
16 Hb_086484_010 0.2331923659 - - PREDICTED: uncharacterized protein LOC101259761 [Solanum lycopersicum]
17 Hb_038190_040 0.24067963 - - PREDICTED: uncharacterized protein LOC105635099 [Jatropha curcas]
18 Hb_003637_030 0.2532980361 - - -
19 Hb_001104_040 0.2689129659 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
20 Hb_000107_130 0.2771678433 - - multicopper oxidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_003793_050 Hb_003793_050 Hb_007943_010 Hb_007943_010 Hb_003793_050--Hb_007943_010 Hb_023528_010 Hb_023528_010 Hb_003793_050--Hb_023528_010 Hb_092043_020 Hb_092043_020 Hb_003793_050--Hb_092043_020 Hb_004529_020 Hb_004529_020 Hb_003793_050--Hb_004529_020 Hb_003392_010 Hb_003392_010 Hb_003793_050--Hb_003392_010 Hb_049827_010 Hb_049827_010 Hb_003793_050--Hb_049827_010 Hb_007943_010--Hb_003392_010 Hb_007943_010--Hb_049827_010 Hb_006387_010 Hb_006387_010 Hb_007943_010--Hb_006387_010 Hb_001863_210 Hb_001863_210 Hb_007943_010--Hb_001863_210 Hb_185830_100 Hb_185830_100 Hb_007943_010--Hb_185830_100 Hb_002708_010 Hb_002708_010 Hb_007943_010--Hb_002708_010 Hb_023528_010--Hb_004529_020 Hb_023528_010--Hb_092043_020 Hb_023528_010--Hb_007943_010 Hb_125948_020 Hb_125948_020 Hb_023528_010--Hb_125948_020 Hb_001104_040 Hb_001104_040 Hb_023528_010--Hb_001104_040 Hb_092043_020--Hb_004529_020 Hb_116436_010 Hb_116436_010 Hb_092043_020--Hb_116436_010 Hb_092043_020--Hb_001104_040 Hb_010555_020 Hb_010555_020 Hb_092043_020--Hb_010555_020 Hb_004529_020--Hb_001104_040 Hb_004529_020--Hb_125948_020 Hb_004529_020--Hb_007943_010 Hb_003392_010--Hb_049827_010 Hb_003392_010--Hb_006387_010 Hb_003392_010--Hb_001863_210 Hb_003392_010--Hb_185830_100 Hb_003392_010--Hb_002708_010 Hb_102355_010 Hb_102355_010 Hb_003392_010--Hb_102355_010 Hb_049827_010--Hb_006387_010 Hb_049827_010--Hb_001863_210 Hb_049827_010--Hb_185830_100 Hb_049827_010--Hb_002708_010 Hb_049827_010--Hb_102355_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.706072 0 0 2.22807 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis