Hb_003811_050

Information

Type -
Description -
Location Contig3811: 94710-99360
Sequence    

Annotation

kegg
ID fve:101311057
description probable LRR receptor-like serine/threonine-protein kinase At3g47570-like
nr
ID KDP44810.1
description hypothetical protein JCGZ_01310 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067LJI6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01310 PE=4 SV=1
Gene Ontology
ID GO:0016301
description lrr receptor-like kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003811_050 0.0 - - hypothetical protein JCGZ_01310 [Jatropha curcas]
2 Hb_000975_130 0.0817780806 - - PREDICTED: uncharacterized protein LOC104445138 [Eucalyptus grandis]
3 Hb_000007_070 0.0919469697 - - hypothetical protein POPTR_0008s11290g [Populus trichocarpa]
4 Hb_081191_010 0.0960829362 - - PREDICTED: pathogenesis-related protein PR-1-like [Jatropha curcas]
5 Hb_002580_020 0.0979604044 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
6 Hb_000956_060 0.0980826778 transcription factor TF Family: bHLH conserved hypothetical protein [Ricinus communis]
7 Hb_000676_130 0.1069548519 - - PREDICTED: peroxidase 72-like [Nelumbo nucifera]
8 Hb_005672_030 0.1146908975 - - PREDICTED: high mobility group B protein 3-like [Jatropha curcas]
9 Hb_000853_010 0.1152946527 - - Pectinesterase-3 precursor, putative [Ricinus communis]
10 Hb_000297_220 0.1452300745 - - SAUR family protein [Theobroma cacao]
11 Hb_004631_030 0.1481297213 - - PREDICTED: putative clathrin assembly protein At4g40080 [Jatropha curcas]
12 Hb_014865_010 0.1498981918 - - hypothetical protein PRUPE_ppa017366mg, partial [Prunus persica]
13 Hb_009615_030 0.1507071003 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_006834_010 0.1509136327 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001416_170 0.1559537377 - - kinase, putative [Ricinus communis]
16 Hb_000429_030 0.1571247496 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
17 Hb_002413_030 0.1588005825 - - sulfate transporter, putative [Ricinus communis]
18 Hb_131417_010 0.1598357965 - - hypothetical protein POPTR_0011s066602g, partial [Populus trichocarpa]
19 Hb_012516_030 0.1650778317 - - PREDICTED: non-specific lipid-transfer protein 2 {ECO:0000303
20 Hb_082733_010 0.1657106037 - - hypothetical protein JCGZ_23600 [Jatropha curcas]

Gene co-expression network

sample Hb_003811_050 Hb_003811_050 Hb_000975_130 Hb_000975_130 Hb_003811_050--Hb_000975_130 Hb_000007_070 Hb_000007_070 Hb_003811_050--Hb_000007_070 Hb_081191_010 Hb_081191_010 Hb_003811_050--Hb_081191_010 Hb_002580_020 Hb_002580_020 Hb_003811_050--Hb_002580_020 Hb_000956_060 Hb_000956_060 Hb_003811_050--Hb_000956_060 Hb_000676_130 Hb_000676_130 Hb_003811_050--Hb_000676_130 Hb_000975_130--Hb_000956_060 Hb_005672_030 Hb_005672_030 Hb_000975_130--Hb_005672_030 Hb_000853_010 Hb_000853_010 Hb_000975_130--Hb_000853_010 Hb_000975_130--Hb_000676_130 Hb_004631_030 Hb_004631_030 Hb_000975_130--Hb_004631_030 Hb_000007_070--Hb_081191_010 Hb_000007_070--Hb_000975_130 Hb_001404_060 Hb_001404_060 Hb_000007_070--Hb_001404_060 Hb_000320_240 Hb_000320_240 Hb_000007_070--Hb_000320_240 Hb_006103_050 Hb_006103_050 Hb_000007_070--Hb_006103_050 Hb_081191_010--Hb_002580_020 Hb_009615_030 Hb_009615_030 Hb_081191_010--Hb_009615_030 Hb_000429_030 Hb_000429_030 Hb_081191_010--Hb_000429_030 Hb_003177_100 Hb_003177_100 Hb_081191_010--Hb_003177_100 Hb_002413_030 Hb_002413_030 Hb_081191_010--Hb_002413_030 Hb_002580_020--Hb_009615_030 Hb_002580_020--Hb_000676_130 Hb_006834_010 Hb_006834_010 Hb_002580_020--Hb_006834_010 Hb_002580_020--Hb_000853_010 Hb_000297_220 Hb_000297_220 Hb_000956_060--Hb_000297_220 Hb_000956_060--Hb_004631_030 Hb_012516_030 Hb_012516_030 Hb_000956_060--Hb_012516_030 Hb_000956_060--Hb_000676_130 Hb_014865_010 Hb_014865_010 Hb_000676_130--Hb_014865_010 Hb_000676_130--Hb_005672_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00732745 0.0164518 0.0751666 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0367361 0

CAGE analysis