Hb_003813_130

Information

Type -
Description -
Location Contig3813: 85984-92393
Sequence    

Annotation

kegg
ID pop:POPTR_0005s15450g
description hypothetical protein
nr
ID XP_012077997.1
description PREDICTED: plastidic glucose transporter 4 [Jatropha curcas]
swissprot
ID Q56ZZ7
description Plastidic glucose transporter 4 OS=Arabidopsis thaliana GN=At5g16150 PE=1 SV=2
trembl
ID A0A067KL20
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13001 PE=3 SV=1
Gene Ontology
ID GO:0016021
description plastidic glucose transporter 4-like isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38638: 89702-92156
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003813_130 0.0 - - PREDICTED: plastidic glucose transporter 4 [Jatropha curcas]
2 Hb_006827_020 0.0581403432 - - conserved hypothetical protein [Ricinus communis]
3 Hb_011930_160 0.0620670734 - - PREDICTED: tetratricopeptide repeat protein 38-like [Jatropha curcas]
4 Hb_103012_010 0.0641983333 - - PREDICTED: uncharacterized protein LOC105638878 [Jatropha curcas]
5 Hb_001946_010 0.0642107712 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
6 Hb_000523_050 0.0665738079 - - microsomal glutathione s-transferase, putative [Ricinus communis]
7 Hb_004055_030 0.0693748619 - - casein kinase, putative [Ricinus communis]
8 Hb_000058_100 0.0694929014 - - PREDICTED: RNA-directed DNA methylation 4 [Jatropha curcas]
9 Hb_000627_230 0.0695109031 - - Uracil phosphoribosyltransferase, putative [Ricinus communis]
10 Hb_106724_020 0.0699465101 - - PREDICTED: actin-related protein 2/3 complex subunit 1A-like isoform X1 [Populus euphratica]
11 Hb_000538_100 0.0763688214 - - conserved hypothetical protein [Ricinus communis]
12 Hb_007059_010 0.0773680851 - - PREDICTED: uncharacterized protein LOC105642418 [Jatropha curcas]
13 Hb_000260_170 0.0778012279 - - PREDICTED: putative zinc transporter At3g08650 [Cucumis sativus]
14 Hb_000630_050 0.0801390649 - - conserved hypothetical protein [Ricinus communis]
15 Hb_007317_110 0.0806916764 - - PREDICTED: uncharacterized RNA-binding protein C660.15-like [Jatropha curcas]
16 Hb_001199_020 0.082338905 - - hypothetical protein JCGZ_25565 [Jatropha curcas]
17 Hb_003163_020 0.0827196502 - - PREDICTED: polyadenylate-binding protein-interacting protein 12-like isoform X1 [Jatropha curcas]
18 Hb_000120_060 0.0836962481 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-1 [Populus euphratica]
19 Hb_003693_070 0.0840130484 - - PREDICTED: S-(hydroxymethyl)glutathione dehydrogenase [Jatropha curcas]
20 Hb_000193_190 0.085252743 - - PREDICTED: dnaJ homolog subfamily C member 16 [Jatropha curcas]

Gene co-expression network

sample Hb_003813_130 Hb_003813_130 Hb_006827_020 Hb_006827_020 Hb_003813_130--Hb_006827_020 Hb_011930_160 Hb_011930_160 Hb_003813_130--Hb_011930_160 Hb_103012_010 Hb_103012_010 Hb_003813_130--Hb_103012_010 Hb_001946_010 Hb_001946_010 Hb_003813_130--Hb_001946_010 Hb_000523_050 Hb_000523_050 Hb_003813_130--Hb_000523_050 Hb_004055_030 Hb_004055_030 Hb_003813_130--Hb_004055_030 Hb_007317_110 Hb_007317_110 Hb_006827_020--Hb_007317_110 Hb_000808_270 Hb_000808_270 Hb_006827_020--Hb_000808_270 Hb_007059_010 Hb_007059_010 Hb_006827_020--Hb_007059_010 Hb_000538_100 Hb_000538_100 Hb_006827_020--Hb_000538_100 Hb_000011_200 Hb_000011_200 Hb_006827_020--Hb_000011_200 Hb_003163_020 Hb_003163_020 Hb_011930_160--Hb_003163_020 Hb_011930_160--Hb_001946_010 Hb_004619_030 Hb_004619_030 Hb_011930_160--Hb_004619_030 Hb_003025_110 Hb_003025_110 Hb_011930_160--Hb_003025_110 Hb_000193_190 Hb_000193_190 Hb_011930_160--Hb_000193_190 Hb_011930_160--Hb_103012_010 Hb_103012_010--Hb_001946_010 Hb_000260_170 Hb_000260_170 Hb_103012_010--Hb_000260_170 Hb_103012_010--Hb_000538_100 Hb_103012_010--Hb_007317_110 Hb_002783_240 Hb_002783_240 Hb_103012_010--Hb_002783_240 Hb_001946_010--Hb_000260_170 Hb_001946_010--Hb_000193_190 Hb_001946_010--Hb_003025_110 Hb_000205_100 Hb_000205_100 Hb_001946_010--Hb_000205_100 Hb_002078_020 Hb_002078_020 Hb_000523_050--Hb_002078_020 Hb_000395_020 Hb_000395_020 Hb_000523_050--Hb_000395_020 Hb_000523_050--Hb_011930_160 Hb_000523_050--Hb_000538_100 Hb_000270_630 Hb_000270_630 Hb_000523_050--Hb_000270_630 Hb_006922_100 Hb_006922_100 Hb_004055_030--Hb_006922_100 Hb_007441_120 Hb_007441_120 Hb_004055_030--Hb_007441_120 Hb_001124_160 Hb_001124_160 Hb_004055_030--Hb_001124_160 Hb_000445_420 Hb_000445_420 Hb_004055_030--Hb_000445_420 Hb_001199_020 Hb_001199_020 Hb_004055_030--Hb_001199_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
42.1662 19.9602 26.0962 34.9018 55.1294 50.2523
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
54.8313 27.6698 35.9534 37.1419 16.9591

CAGE analysis